SCOPe 2.05: Domain d4faaa_: 4faa A:

Lineage for d4faaa_ (4faa A:)

1. Root: SCOPe 2.05

2. Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)

3. Fold f.24: Cytochrome c oxidase subunit I-like [81443] (1 superfamily)
   12 transmembrane helices in an approximate threefold rotational symmetric arrangement

4. Superfamily f.24.1: Cytochrome c oxidase subunit I-like [81442] (1 family)

5. Family f.24.1.1: Cytochrome c oxidase subunit I-like [81441] (5 proteins)
   the largest and best conserved subunit, contains two heme groups, low spin heme a and high spin heme a3

6. Protein Bacterial ba3 type cytochrome c oxidase subunit I [81438] (1 species)

7. Species Thermus thermophilus [TaxId:274] [81437] (25 PDB entries)

8. Domain d4faaa_: 4faa A: [194417]
   Other proteins in same PDB: d4faab1, d4faab2, d4faac_
   automated match to d1xmea_
   complexed with cu, cua, has, hem, olc, peo; mutant

Details for d4faaa_

PDB Entry: 4faa, 2.8 Å

PDB Description: Structure of Recombinant Cytochrome ba3 Oxidase mutant A120F+A204F from Thermus thermophilus

PDB Compounds: (A:) Cytochrome c oxidase subunit 1

SCOPe Domain Sequences for d4faaa_:

Sequence, based on SEQRES records:

>d4faaa_ f.24.1.1 (A:) Bacterial ba3 type cytochrome c oxidase subunit I {Thermus thermophilus [TaxId: 274]}
eaypekkatlyflvlgflalivgslfgpfqalnygnvdaypllkrllpfvqsyyqgltlh
gvlnaivftqlfaqaimvylparelnmrpnmglmwlswwmafiglvvfalpllaneatvl
ytfypplkghwafylgasvfvlstwvsiyivldlwrrwkaanpgkvtplvtymavvfwlm
wflaslglvlefvlfllpwsfglvegvdplvartlfwwtghpivyfwllpayaiiytilp
kqaggklvsdpmarlafllflllstpvgfhhqfadpgidptwkmihsvltlfvavpslmt
aftvaaslefagrlrggrglfgwiralpwdnpafvapvlgllgfipggaggivnasftld
yvvhntawvpghfhlqvaslvtltamgslywllpnltgkpisdaqrrlglavvwlwflgm
mimavglhwagllnvprrayiaqvpdayphaavpmvfnvlagivllvalllfiyglfsvl
lsrerkpelaeaplpfaevisgpedrrlvlamdrigfwfavaailvvlaygptlvqlfgh
lnpvpgwrlw

Sequence, based on observed residues (ATOM records):

>d4faaa_ f.24.1.1 (A:) Bacterial ba3 type cytochrome c oxidase subunit I {Thermus thermophilus [TaxId: 274]}
eaypekkatlyflvlgflalivgslfgpfqalnygnvdaypllkrllpfvqsyyqgltlh
gvlnaivftqlfaqaimvylparelnmrpnmglmwlswwmafiglvvfalpllaneatvl
ytfypplkghwafylgasvfvlstwvsiyivldlwrrwkaanpgkvtplvtymavvfwlm
wflaslglvlefvlfllpwsfglvegvdplvartlfwwtghpivyfwllpayaiiytilp
kqaggklvsdpmarlafllflllstpvgfhhqfadpgidptwkmihsvltlfvavpslmt
aftvaaslefagrlrggrglfgwiralpwdnpafvapvlgllgfipggaggivnasftld
yvvhntawvpghfhlqvaslvtltamgslywllpnltgkpisdaqrrlglavvwlwflgm
mimavglhwagllnvprrayiaqvpdayphaavpmvfnvlagivllvalllfiyglfsvp
lpfaevisgdrrlvlamdrigfwfavaailvvlaygptlvqlfghlnpvpgwrlw

Timeline for d4faaa_:

• d4faaa_ first appeared in SCOPe 2.02
  
• d4faaa_ appears in SCOPe 2.04
  
• d4faaa_ appears in SCOPe 2.06
  
• d4faaa_ appears in the current release, SCOPe 2.08