SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1986516Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 1986517Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 1987129Family a.22.1.3: TBP-associated factors, TAFs [47134] (14 protein domains)
  6. 1987187Protein automated matches [194413] (3 species)
    not a true protein

Species:

  1. 1987188Aspergillus nidulans [TaxId:227321] [194414] (2 PDB entries)
    1. Domain for 4g91:
    2. Domain for 4g92:
  2. 1987191Human (Homo sapiens) [TaxId:9606] [270229] (1 PDB entry)
  3. 2283597Arabidopsis thaliana [TaxId:3702] [326898] (1 PDB entry)

More info for Protein automated matches from a.22.1.3: TBP-associated factors, TAFs

Timeline for Protein automated matches from a.22.1.3: TBP-associated factors, TAFs: