SCOPe 2.03: Domain d4gvia_: 4gvi A:

Lineage for d4gvia_ (4gvi A:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (46 species)
   not a true protein

7. Species Salmonella enterica [TaxId:99287] [194211] (5 PDB entries)

8. Domain d4gvia_: 4gvi A: [194216]
   automated match to d2oxna_
   complexed with ah0, mes, nag; mutant

Details for d4gvia_

PDB Entry: 4gvi, 1.55 Å

PDB Description: crystal structure of mutant (d248n) salmonella typhimurium family 3 glycoside hydrolase (nagz) in complex with glcnac-1,6-anhmurnac

PDB Compounds: (A:) Beta-hexosaminidase

SCOPe Domain Sequences for d4gvia_:

Sequence, based on SEQRES records:

>d4gvia_ c.1.8.0 (A:) automated matches {Salmonella enterica [TaxId: 99287]}
mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavtadshketp
cdprpetdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelg
fdgvifsndlsmegaaimgsyaeraqasldagcdmilvcnnrkgavsvldnlspikaerv
trlyhkgsfsrrelmdsarwktasaqlnqlherwqeekag

Sequence, based on observed residues (ATOM records):

>d4gvia_ c.1.8.0 (A:) automated matches {Salmonella enterica [TaxId: 99287]}
mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavtadshketp
cdprpetdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelg
fdgvifsndlsmsyaeraqasldagcdmilvcnnrkgavsvldnlspikaervtrlyhkg
sfsrrelmdsarwktasaqlnqlherwqeekag

Timeline for d4gvia_:

• d4gvia_ first appeared in SCOPe 2.02
  
• d4gvia_ appears in SCOPe 2.04
  
• d4gvia_ appears in the current release, SCOPe 2.08