SCOPe 2.08: Domain d4gvhb_: 4gvh B:

Lineage for d4gvhb_ (4gvh B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (132 species)
   not a true protein

7. Species Salmonella enterica [TaxId:99287] [194211] (5 PDB entries)

8. Domain d4gvhb_: 4gvh B: [194212]
   automated match to d2oxna_
   complexed with 0xy, mes

Details for d4gvhb_

PDB Entry: 4gvh, 1.45 Å

PDB Description: crystal structure of salmonella typhimurium family 3 glycoside hydrolase (nagz) covalently bound to 5-fluoro-glcnac.

PDB Compounds: (B:) Beta-hexosaminidase

SCOPe Domain Sequences for d4gvhb_:

Sequence, based on SEQRES records:

>d4gvhb_ c.1.8.0 (B:) automated matches {Salmonella enterica [TaxId: 99287]}
mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavtadshketp
cdprpetdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelg
fdgvifsddlsmegaaimgsyaeraqasldagcdmilvcnnrkgavsvldnlspikaerv
trlyhkgsfsrrelmdsarwktasaqlnqlherwqeekagh

Sequence, based on observed residues (ATOM records):

>d4gvhb_ c.1.8.0 (B:) automated matches {Salmonella enterica [TaxId: 99287]}
mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavtetpcdprp
etdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelgfdgvi
fsddlssyaeraqasldagcdmilvcnnrkgavsvldnlspikaervtrlyhkgsfsrre
lmdsarwktasaqlnqlherwqeekagh

Timeline for d4gvhb_:

• d4gvhb_ first appeared in SCOPe 2.02
  
• d4gvhb_ appears in SCOPe 2.07