SCOPe 2.02: Domain d4i6la_: 4i6l A:

Lineage for d4i6la_ (4i6l A:)

1. Root: SCOPe 2.02

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (23 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.0: automated matches [191342] (1 protein)
   not a true family

6. Protein automated matches [190230] (10 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187072] (10 PDB entries)

8. Domain d4i6la_: 4i6l A: [194133]
   Other proteins in same PDB: d4i6lb_
   automated match to d2zfya_

Details for d4i6la_

PDB Entry: 4i6l, 2.49 Å

PDB Description: Crystal structure of OTUB1 in complex with ubiquitin variant

PDB Compounds: (A:) Ubiquitin thioesterase OTUB1

SCOPe Domain Sequences for d4i6la_:

Sequence, based on SEQRES records:

>d4i6la_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gsnplvserlelsvlykeyaeddniyqqkikdlhkkysyirktrpdgnsfyrafgfshle
allddskelqrfkavsakskedlvsqgfteftiedfhntfmdlieqvekqtsvadllasf
ndqstsdylvvylrlltsgylqreskffehfieggrtvkefcqqevepmckesdhihiia
laqalsvsiqveymdrgeggttnphifpegsepkvyllyrpghydilyk

Sequence, based on observed residues (ATOM records):

>d4i6la_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gsnplvserlelsvlykeydniyqqkikdlhkkysyirktrpdgnsfyrafgfshleall
ddskelqrfkavsakskedlvsqgfteftiedfhntfmdlieqvekqtsvadllasfndq
stsdylvvylrlltsgylqreskffehfieggrtvkefcqqevepmckesdhihiialaq
alsvsiqveymphifpegsepkvyllyrpghydilyk

Timeline for d4i6la_:

• d4i6la_ is new in SCOPe 2.02-stable
  
• d4i6la_ appears in SCOPe 2.03
  
• d4i6la_ appears in the current release, SCOPe 2.08, called d4i6la1