Lineage for d4i6lb1 (4i6l B:1-73)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2177211Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2177212Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2177213Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2177487Protein Ubiquitin [54238] (8 species)
  7. 2177587Species Human (Homo sapiens) [TaxId:9606] [54239] (209 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2177799Domain d4i6lb1: 4i6l B:1-73 [194132]
    Other proteins in same PDB: d4i6la1, d4i6la2, d4i6lb2
    automated match to d3noba_

Details for d4i6lb1

PDB Entry: 4i6l (more details), 2.49 Å

PDB Description: Crystal structure of OTUB1 in complex with ubiquitin variant
PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d4i6lb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4i6lb1 d.15.1.1 (B:1-73) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d4i6lb1:

Click to download the PDB-style file with coordinates for d4i6lb1.
(The format of our PDB-style files is described here.)

Timeline for d4i6lb1:

View in 3D
Domains from same chain:
(mouse over for more information)