Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1426347Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
    contains large mixed beta-sheet
  4. 1426348Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families) (S)
  5. 1426349Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain [55682] (16 proteins)
  6. 1426573Protein automated matches [193659] (3 species)
    not a true protein

Species:

  1. 1426574Escherichia coli [TaxId:83333] [227935] (4 PDB entries)
    1. Domains for 4hwo:
      1. 1426579Domain d4hwoa1: 4hwo A:242-532 [234708]
        Other proteins in same PDB: d4hwoa2, d4hwob2
        automated match to d4hwpb1
        protein/RNA complex; complexed with 409, zn
      2. 1426580Domain d4hwob1: 4hwo B:242-532 [234709]
        Other proteins in same PDB: d4hwoa2, d4hwob2
        automated match to d4hwpb1
        protein/RNA complex; complexed with 409, zn
    2. Domains for 4hwp:
      1. 1426577Domain d4hwpa1: 4hwp A:242-532 [234710]
        Other proteins in same PDB: d4hwpa2, d4hwpb2
        automated match to d4hwpb1
        protein/RNA complex; complexed with x16, zn
      2. 1426578Domain d4hwpb1: 4hwp B:242-532 [227936]
        Other proteins in same PDB: d4hwpa2, d4hwpb2
        automated match to d1qf6a4
        protein/RNA complex; complexed with x16, zn
    3. Domains for 4hwr:
      1. 1426581Domain d4hwra1: 4hwr A:241-532 [234711]
        Other proteins in same PDB: d4hwra2
        automated match to d4hwpb1
        protein/RNA complex; complexed with 1b2, zn
      2. 1426582Domain d4hwrb1: 4hwr B:242-532 [234716]
        Other proteins in same PDB: d4hwra2
        automated match to d4hwpb1
    4. Domains for 4hws:
      1. 1426575Domain d4hwsa1: 4hws A:242-532 [234717]
        Other proteins in same PDB: d4hwsa2, d4hwsb2
        automated match to d4hwpb1
        protein/RNA complex; complexed with 1b3, zn
      2. 1426576Domain d4hwsb1: 4hws B:242-532 [234720]
        Other proteins in same PDB: d4hwsa2, d4hwsb2
        automated match to d4hwpb1
        protein/RNA complex; complexed with 1b3, zn
  2. 1426583Pyrococcus abyssi [TaxId:29292] [193660] (6 PDB entries)
    1. Domains for 3p8t:
      1. 1426584Domain d3p8ta_: 3p8t A: [214699]
        automated match to d3p8vb_
      2. 1426585Domain d3p8tb_: 3p8t B: [214700]
        automated match to d3p8vb_
    2. Domains for 3p8v:
      1. 1426590Domain d3p8va_: 3p8v A: [200206]
        automated match to d3p8vb_
        complexed with asp
      2. 1426591Domain d3p8vb_: 3p8v B: [193661]
        automated match to d1nnha_
        complexed with asp
    3. Domains for 3p8y:
      1. 1426588Domain d3p8ya_: 3p8y A: [214704]
        automated match to d3p8vb_
        complexed with asn
      2. 1426589Domain d3p8yb_: 3p8y B: [214705]
        automated match to d3p8vb_
        complexed with asn
    4. Domains for 3reu:
      1. 1426592Domain d3reua_: 3reu A: [215780]
        automated match to d3p8vb_
        complexed with asp, atp, mg
      2. 1426593Domain d3reub_: 3reu B: [215781]
        automated match to d3p8vb_
        complexed with asp, atp, mg
    5. Domains for 3rex:
      1. 1426586Domain d3rexa_: 3rex A: [215786]
        automated match to d3p8vb_
        complexed with amp, mg
      2. 1426587Domain d3rexb_: 3rex B: [215787]
        automated match to d3p8vb_
        complexed with amp, mg
    6. Domains for 3rl6:
      1. 1426594Domain d3rl6a_: 3rl6 A: [215914]
        automated match to d3p8vb_
        complexed with amp, asn, mg
      2. 1426595Domain d3rl6b_: 3rl6 B: [215915]
        automated match to d3p8vb_
        complexed with amp, asn, mg
  3. 1426596Trypanosoma brucei [TaxId:999953] [237835] (1 PDB entry)

More info for Protein automated matches from d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain

Timeline for Protein automated matches from d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain: