SCOPe 2.02: Domain d4dy0b_: 4dy0 B:

Lineage for d4dy0b_ (4dy0 B:)

1. Root: SCOPe 2.02

2. Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)

3. Fold e.1: Serpins [56573] (1 superfamily)
   contains a cluster of helices and a beta-sandwich

4. Superfamily e.1.1: Serpins [56574] (2 families)

5. Family e.1.1.0: automated matches [191406] (1 protein)
   not a true family

6. Protein automated matches [190555] (5 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187538] (5 PDB entries)

8. Domain d4dy0b_: 4dy0 B: [193593]
   automated match to d1lj5a_
   complexed with gol, so4

Details for d4dy0b_

PDB Entry: 4dy0, 2.35 Å

PDB Description: crystal structure of native protease nexin-1 with heparin

PDB Compounds: (B:) Glia-derived nexin

SCOPe Domain Sequences for d4dy0b_:

Sequence, based on SEQRES records:

>d4dy0b_ e.1.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nplsleelgsntgiqvfnqivksrphdnivisphgiasvlgmlqlgadgrtkkqlamvmr
ygvngvgkilkkinkaivskknkdivtvanavfvknaseievpfvtrnkdvfqcevrnvn
fedpasacdsinawvknetrdmidnllspdlidgvltrlvlvnavyfkglwksrfqpent
kkrtfvaadgksyqvpmlaqlsvfrcgstsapndlwynfielpyhgesismlialptess
tplsaiiphistktidswmsimvpkrvqvilpkftavaqtdlkeplkvlgitdmfdsska
nfakittgsenlhvshilqkakievsedgtkasaattailiarssppwfivdrpflffir
hnptgavlfmgqinkp

Sequence, based on observed residues (ATOM records):

>d4dy0b_ e.1.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nplsleelgsntgiqvfnqivksrphdnivisphgiasvlgmlqlgadgrtkkqlamvmr
ygvngvgkilkkinkaivskknkdivtvanavfvknaseievpfvtrnkdvfqcevrnvn
fedpasacdsinawvknetrdmidnllspdlidgvltrlvlvnavyfkglwksrfqpent
kkrtfvaadgksyqvpmlaqlsvfrcgstsapndlwynfielpyhgesismlialptess
tplsaiiphistktidswmsimvpkrvqvilpkftavaqtdlkeplkvlgitdmfdsska
nfakittgsenlhvshilqkakievsedgtkailiarssppwfivdrpflffirhnptga
vlfmgqinkp

Timeline for d4dy0b_:

• d4dy0b_ is new in SCOPe 2.02-stable
  
• d4dy0b_ appears in SCOPe 2.03
  
• d4dy0b_ appears in the current release, SCOPe 2.08