Species:

1. Acinetobacter baumannii [TaxId:575584] [196867] (29 PDB entries)

   1. Domain for 4fop:

      • Domain d4fopa_: 4fop A: [221409] automated match to d4jy7a_ complexed with act, gol, peg

   2. Domain for 4fot:

      • Domain d4fota_: 4fot A: [221412] automated match to d4jy7a_ complexed with edo, gol, peg

   3. Domain for 4hoy:

      • Domain d4hoya_: 4hoy A: [222703] automated match to d4jy7a_ complexed with act, edo, gol, peg

   4. Domain for 4iko:

      • Domain d4ikoa_: 4iko A: [223246] automated match to d4jy7a_ complexed with act, edo, gol, peg

   5. Domain for 4jwk:

      • Domain d4jwka_: 4jwk A: [197257] automated match to d2ptha_ protein/RNA complex; complexed with ctn

   6. Domain for 4jx9:

      • Domain d4jx9a_: 4jx9 A: [224059] automated match to d4jy7a_ protein/RNA complex; complexed with uri

   7. Domain for 4jy7:

      • Domain d4jy7a_: 4jy7 A: [196868] automated match to d2ptha_ complexed with act, edo, gol, peg

   8. Domain for 4lwq:

      • Domain d4lwqa1: 4lwq A:1-193 [224776] Other proteins in same PDB: d4lwqa2 automated match to d4jy7a_ complexed with gol

   9. Domain for 4olj:

      • Domain d4olja1: 4olj A:1-193 [236933] Other proteins in same PDB: d4olja2 automated match to d4lwra_ complexed with gol, tla; mutant

   10. Domain for 5y98:

       • Domain d5y98a1: 5y98 A:1-193 [339034] Other proteins in same PDB: d5y98a2 automated match to d4qaja_ complexed with gol

   11. Domain for 5y9a:

       • Domain d5y9aa1: 5y9a A:1-193 [339042] Other proteins in same PDB: d5y9aa2 automated match to d4qaja_ protein/RNA complex; complexed with ar3, po4

   12. Domains for 5yl8:

       1. Domain d5yl8a_: 5yl8 A: [341128] automated match to d4qaja_ complexed with na

       2. Domain d5yl8b_: 5yl8 B: [341174] automated match to d4qaja_ complexed with na

   13. Domains for 5yla:

       1. Domain d5ylaa_: 5yla A: [341129] automated match to d4qaja_

       2. Domain d5ylab_: 5yla B: [341132] automated match to d4qaja_

   14. Domains for 5yn4:

       1. Domain d5yn4a_: 5yn4 A: [341722] automated match to d4qaja_

       2. Domain d5yn4b_: 5yn4 B: [341701] automated match to d4qaja_

   15. Domain for 5zzv:

       • Domain d5zzva_: 5zzv A: [353792] automated match to d4qaja_ complexed with edo

   16. Domain for 6a31:

       • Domain d6a31a_: 6a31 A: [353837] automated match to d4qaja_ complexed with na

   17. Domain for 6ivv:

       • Domain d6ivva1: 6ivv A:1-193 [361477] Other proteins in same PDB: d6ivva2 automated match to d4qaja_ complexed with cl, edo, peg

   18. Domain for 6ix6:

       • Domain d6ix6a1: 6ix6 A:1-193 [361741] Other proteins in same PDB: d6ix6a2 automated match to d4qaja_ protein/RNA complex; complexed with pol

   19. Domain for 6iye:

       • Domain d6iyea1: 6iye A:1-193 [361711] Other proteins in same PDB: d6iyea2 automated match to d4qaja_

   20. Domain for 6j93:

       • Domain d6j93a1: 6j93 A:1-193 [364607] Other proteins in same PDB: d6j93a2 automated match to d4qaja_ complexed with edo

   21. Domain for 6jgu:

       • Domain d6jgua1: 6jgu A:1-193 [365629] Other proteins in same PDB: d6jgua2 automated match to d4qaja_

   22. Domain for 6jj1:

       • Domain d6jj1a1: 6jj1 A:1-193 [366005] Other proteins in same PDB: d6jj1a2 automated match to d4qaja_ complexed with cl, edo

   23. Domain for 6jjq:

       • Domain d6jjqa1: 6jjq A:1-193 [365635] Other proteins in same PDB: d6jjqa2 automated match to d4qaja_ complexed with cl, na, peg

   24. Domain for 6jkx:

       • Domain d6jkxa1: 6jkx A:1-193 [366009] Other proteins in same PDB: d6jkxa2 automated match to d4qaja_ complexed with cl, moh, na

   25. Domain for 6jqt:

       • Domain d6jqta1: 6jqt A:1-193 [367864] Other proteins in same PDB: d6jqta2 automated match to d4qaja_

   26. Domain for 6kl8:

       • Domain d6kl8a1: 6kl8 A:1-193 [372538] Other proteins in same PDB: d6kl8a2 automated match to d4qaja_ complexed with cl, edo, na

   27. Domains for 6lso:

       1. Domain d6lsoa_: 6lso A: [379787] automated match to d4qaja_

       2. Domain d6lsob_: 6lso B: [379783] automated match to d4qaja_

   28. Domains for 6lsp:

       1. Domain d6lspa_: 6lsp A: [379804] automated match to d4qaja_

       2. Domain d6lspb_: 6lsp B: [379816] automated match to d4qaja_

   29. Domain for 7csn:

       • Domain d7csna1: 7csn A:1-193 [390023] Other proteins in same PDB: d7csna2 automated match to d4qaja_

2. Francisella tularensis [TaxId:119856] [233012] (1 PDB entry)

   • Domain for 3nea:

     • Domain d3neaa_: 3nea A: [233013] automated match to d4lwra_ complexed with cl, edo

3. Mycobacterium smegmatis [TaxId:246196] [225939] (5 PDB entries)

   1. Domain for 2lgj:

      • Domain d2lgja_: 2lgj A: [242875] automated match to d3p2ja_

   2. Domain for 2naf:

      • Domain d2nafa_: 2naf A: [328143] automated match to d2lgja_

   3. Domain for 3kjz:

      • Domain d3kjza_: 3kjz A: [212394] automated match to d4jy7a_

   4. Domain for 3kk0:

      • Domain d3kk0a_: 3kk0 A: [212395] automated match to d4jy7a_ complexed with bme, edo, ipa, peg

   5. Domain for 3p2j:

      • Domain d3p2ja_: 3p2j A: [214628] automated match to d4jy7a_

4. Mycobacterium tuberculosis [TaxId:83332] [225299] (7 PDB entries)

   1. Domain for 2jrc:

      • Domain d2jrca_: 2jrc A: [242270] automated match to d1ryna_

   2. Domain for 2z2i:

      • Domain d2z2ia_: 2z2i A: [207765] automated match to d4jy7a_

   3. Domains for 2z2j:

      1. Domain d2z2ja_: 2z2j A: [207766] automated match to d4jy7a_

      2. Domain d2z2jb_: 2z2j B: [207767] automated match to d4jy7a_

   4. Domain for 2z2k:

      • Domain d2z2ka_: 2z2k A: [207768] automated match to d4jy7a_ complexed with cl

   5. Domain for 3tck:

      • Domain d3tcka_: 3tck A: [216735] automated match to d4jy7a_

   6. Domains for 3tcn:

      1. Domain d3tcna_: 3tcn A: [216740] automated match to d4jy7a_

      2. Domain d3tcnb_: 3tcn B: [216741] automated match to d4jy7a_

   7. Domain for 3td2:

      • Domain d3td2a_: 3td2 A: [216748] automated match to d4jy7a_

5. Pseudomonas aeruginosa, PA01 [TaxId:208964] [193327] (9 PDB entries)

   1. Domains for 4dhw:

      1. Domain d4dhwa_: 4dhw A: [219767] automated match to d4jc4a_ complexed with 0l1

      2. Domain d4dhwb_: 4dhw B: [219768] automated match to d4jc4a_ complexed with 0l1

   2. Domains for 4djj:

      1. Domain d4djja_: 4djj A: [219795] automated match to d4jc4a_ protein/RNA complex; complexed with pml

      2. Domain d4djjb_: 4djj B: [219796] automated match to d4jc4a_ protein/RNA complex; complexed with pml

   3. Domains for 4erx:

      1. Domain d4erxa_: 4erx A: [220788] automated match to d4jc4a_ protein/RNA complex; complexed with peg

      2. Domain d4erxb_: 4erx B: [220789] automated match to d4jc4a_ protein/RNA complex; complexed with peg

   4. Domains for 4fno:

      1. Domain d4fnoa_: 4fno A: [221374] automated match to d4jc4a_ complexed with gol, peg

      2. Domain d4fnob_: 4fno B: [221375] automated match to d4jc4a_ complexed with gol, peg

   5. Domain for 4fyj:

      • Domain d4fyja1: 4fyj A:2-193 [193328] Other proteins in same PDB: d4fyja2 automated match to d2ptha_

   6. Domain for 4jc4:

      • Domain d4jc4a_: 4jc4 A: [196750] automated match to d2ptha_ complexed with gol

   7. Domain for 4qaj:

      • Domain d4qaja_: 4qaj A: [257643] automated match to d4jc4a_

   8. Domain for 4qbk:

      • Domain d4qbka_: 4qbk A: [257650] automated match to d4jc4a_ protein/RNA complex; complexed with 3nz, gol

   9. Domain for 4qd3:

      • Domain d4qd3a_: 4qd3 A: [257660] automated match to d4jc4a_ complexed with 5ae, gol

6. Staphylococcus aureus [TaxId:1280] [312074] (1 PDB entry)

   • Domains for 4yly:

     1. Domain d4ylya1: 4yly A:1-190 [312075] Other proteins in same PDB: d4ylya2, d4ylyb2 automated match to d4qt4a_ complexed with gol

     2. Domain d4ylyb1: 4yly B:1-190 [312154] Other proteins in same PDB: d4ylya2, d4ylyb2 automated match to d4qt4a_ complexed with gol

7. Streptococcus pyogenes [TaxId:471876] [257616] (2 PDB entries)

   1. Domains for 4q55:

      1. Domain d4q55a_: 4q55 A: [308108] automated match to d4qt4a_

      2. Domain d4q55b_: 4q55 B: [308109] automated match to d4qt4a_

   2. Domains for 4qt4:

      1. Domain d4qt4a_: 4qt4 A: [258809] automated match to d4jx9a_

      2. Domain d4qt4b_: 4qt4 B: [258811] automated match to d4jx9a_

8. Thermus thermophilus [TaxId:300852] [358143] (1 PDB entry)

   • Domain for 5zx8:

     • Domain d5zx8a1: 5zx8 A:1-182 [358144] Other proteins in same PDB: d5zx8a2 automated match to d5ivpb_ complexed with flc, mpd

9. Vibrio cholerae [TaxId:243277] [311867] (10 PDB entries)

   1. Domains for 4z86:

      1. Domain d4z86a1: 4z86 A:3-197 [318288] Other proteins in same PDB: d4z86a2, d4z86b2 automated match to d4y2zb_ mutant

      2. Domain d4z86b1: 4z86 B:3-197 [318276] Other proteins in same PDB: d4z86a2, d4z86b2 automated match to d4y2zb_ mutant

   2. Domains for 4zxp:

      1. Domain d4zxpa1: 4zxp A:3-197 [318844] Other proteins in same PDB: d4zxpa2, d4zxpb2 automated match to d4y2zb_ complexed with flc

      2. Domain d4zxpb1: 4zxp B:3-197 [318847] Other proteins in same PDB: d4zxpa2, d4zxpb2 automated match to d4y2zb_ complexed with flc

   3. Domain for 5b6j:

      • Domain d5b6ja_: 5b6j A: [332953] automated match to d4y2zb_ mutant

   4. Domains for 5ekt:

      1. Domain d5ekta_: 5ekt A: [324917] automated match to d4y2zb_ complexed with flc; mutant

      2. Domain d5ektb_: 5ekt B: [324863] automated match to d4y2zb_ complexed with flc; mutant

   5. Domain for 5gvz:

      • Domain d5gvza_: 5gvz A: [339057] automated match to d4y2zb_ complexed with act, so4

   6. Domains for 5h6f:

      1. Domain d5h6fa_: 5h6f A: [341464] automated match to d4y2zb_ mutant

      2. Domain d5h6fb_: 5h6f B: [341459] automated match to d4y2zb_ mutant

   7. Domains for 5ike:

      1. Domain d5ikea_: 5ike A: [330752] automated match to d4y2zb_ mutant

      2. Domain d5ikeb_: 5ike B: [330695] automated match to d4y2zb_ mutant

   8. Domains for 5imb:

      1. Domain d5imba_: 5imb A: [330656] automated match to d4y2zb_ mutant

      2. Domain d5imbb_: 5imb B: [330722] automated match to d4y2zb_ mutant

   9. Domains for 5ivp:

      1. Domain d5ivpa_: 5ivp A: [331645] automated match to d4y2zb_ complexed with flc

      2. Domain d5ivpb_: 5ivp B: [331649] automated match to d4y2zb_ complexed with flc

   10. Domains for 5zk0:

       1. Domain d5zk0a_: 5zk0 A: [353343] automated match to d5h6fa_ complexed with na; mutant

       2. Domain d5zk0b_: 5zk0 B: [353341] automated match to d5h6fa_ complexed with na; mutant

10. Vibrio cholerae [TaxId:345073] [332888] (1 PDB entry)

    • Domain for 5b6j:

      • Domain d5b6jb_: 5b6j B: [332889] automated match to d4y2zb_ mutant

11. Vibrio cholerae [TaxId:579112] [268011] (1 PDB entry)

    • Domain for 2mjl:

      • Domain d2mjla1: 2mjl A:3-197 [268012] Other proteins in same PDB: d2mjla2 automated match to d2lgja_

More info for Protein automated matches from c.56.3.0: automated matches

Timeline for Protein automated matches from c.56.3.0: automated matches:

• Protein automated matches from c.56.3.0: automated matches first appeared in SCOPe 2.02
  
• Protein automated matches from c.56.3.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from c.56.3.0: automated matches appears in the current release, SCOPe 2.08