Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1860688Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 1861838Superfamily c.56.3: Peptidyl-tRNA hydrolase-like [53178] (2 families) (S)
  5. 1861852Family c.56.3.0: automated matches [193325] (1 protein)
    not a true family
  6. 1861853Protein automated matches [193326] (7 species)
    not a true protein

Species:

  1. 1861854Acinetobacter baumannii [TaxId:575584] [196867] (11 PDB entries)
    1. Domain for 3wh4:
    2. Domain for 4fop:
    3. Domain for 4fot:
    4. Domain for 4hoy:
    5. Domain for 4iko:
    6. Domain for 4jwk:
    7. Domain for 4jx9:
    8. Domain for 4jy7:
    9. Domain for 4lwq:
    10. Domain for 4lwr:
    11. Domain for 4olj:
  2. 1861866Francisella tularensis [TaxId:119856] [233012] (1 PDB entry)
  3. 1861868Mycobacterium smegmatis [TaxId:246196] [225939] (4 PDB entries)
    1. Domain for 2lgj:
    2. Domain for 3kjz:
    3. Domain for 3kk0:
    4. Domain for 3p2j:
  4. 1861873Mycobacterium tuberculosis [TaxId:83332] [225299] (7 PDB entries)
    1. Domain for 2jrc:
    2. Domain for 2z2i:
    3. Domains for 2z2j:
      1. 1861877Domain d2z2ja_: 2z2j A: [207766]
        automated match to d4jy7a_
      2. 1861878Domain d2z2jb_: 2z2j B: [207767]
        automated match to d4jy7a_
    4. Domain for 2z2k:
    5. Domain for 3tck:
    6. Domains for 3tcn:
      1. 1861875Domain d3tcna_: 3tcn A: [216740]
        automated match to d4jy7a_
      2. 1861876Domain d3tcnb_: 3tcn B: [216741]
        automated match to d4jy7a_
    7. Domain for 3td2:
  5. 1861883Pseudomonas aeruginosa [TaxId:208964] [193327] (9 PDB entries)
    1. Domains for 4dhw:
      1. 1861890Domain d4dhwa_: 4dhw A: [219767]
        automated match to d4jc4a_
        complexed with 0l1
      2. 1861891Domain d4dhwb_: 4dhw B: [219768]
        automated match to d4jc4a_
        complexed with 0l1
    2. Domains for 4djj:
      1. 1861895Domain d4djja_: 4djj A: [219795]
        automated match to d4jc4a_
        protein/RNA complex; complexed with pml
      2. 1861896Domain d4djjb_: 4djj B: [219796]
        automated match to d4jc4a_
        protein/RNA complex; complexed with pml
    3. Domains for 4erx:
      1. 1861888Domain d4erxa_: 4erx A: [220788]
        automated match to d4jc4a_
        protein/RNA complex; complexed with peg
      2. 1861889Domain d4erxb_: 4erx B: [220789]
        automated match to d4jc4a_
        protein/RNA complex; complexed with peg
    4. Domains for 4fno:
      1. 1861893Domain d4fnoa_: 4fno A: [221374]
        automated match to d4jc4a_
        complexed with gol, peg
      2. 1861894Domain d4fnob_: 4fno B: [221375]
        automated match to d4jc4a_
        complexed with gol, peg
    5. Domain for 4fyj:
    6. Domain for 4jc4:
    7. Domain for 4qaj:
    8. Domain for 4qbk:
    9. Domain for 4qd3:
  6. 1861897Streptococcus pyogenes [TaxId:471876] [257616] (1 PDB entry)
  7. 1861900Vibrio cholerae [TaxId:579112] [268011] (1 PDB entry)

More info for Protein automated matches from c.56.3.0: automated matches

Timeline for Protein automated matches from c.56.3.0: automated matches: