Lineage for d4f13a1 (4f13 A:6-356)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2722035Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
    multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
  4. 2722434Superfamily a.102.3: Chondroitin AC/alginate lyase [48230] (2 families) (S)
    incomplete toroid
  5. 2722435Family a.102.3.1: Alginate lyase A1-III [48231] (1 protein)
  6. 2722436Protein Alginate lyase A1-III [48232] (1 species)
  7. 2722437Species Sphingomonas sp., A1 [TaxId:28214] [48233] (8 PDB entries)
  8. 2722450Domain d4f13a1: 4f13 A:6-356 [192411]
    Other proteins in same PDB: d4f13a2, d4f13b2

Details for d4f13a1

PDB Entry: 4f13 (more details), 2.21 Å

PDB Description: alginate lyase a1-iii y246f complexed with tetrasaccharide
PDB Compounds: (A:) Alginate lyase

SCOPe Domain Sequences for d4f13a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4f13a1 a.102.3.1 (A:6-356) Alginate lyase A1-III {Sphingomonas sp., A1 [TaxId: 28214]}
hpfdqavvkdptasyvdvkarrtflqsgqlddrlkaalpkeydctteatpnpqqgemvip
rrylsgnhgpvnpdyepvvtlyrdfekisatlgnlyvatgkpvyatcllnmldkwakada
llnydpksqswyqvewsaataafalstmmaepnvdtaqrervvkwlnrvarhqtsfpggd
tsccnnhsywrgqeatiigviskddelfrwglgryvqamglinedgsfvhemtrheqslh
fqnyamlpltmiaetasrqgidlyaykengrdihsarkfvfaavknpdlikkyasepqdt
rafkpgrgdlnwieyqrarfgfadelgfmtvpifdprtggsatllaykpqg

SCOPe Domain Coordinates for d4f13a1:

Click to download the PDB-style file with coordinates for d4f13a1.
(The format of our PDB-style files is described here.)

Timeline for d4f13a1:

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Domains from same chain:
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d4f13a2