Lineage for d3gptd_ (3gpt D:)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1222614Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 1222615Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 1222781Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 1223291Protein Proteasome beta subunit (catalytic) [56252] (5 species)
  7. 1223300Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (34 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 1223317Domain d3gptd_: 3gpt D: [191716]
    Other proteins in same PDB: d3gpta_, d3gptb_, d3gptc_, d3gpte_, d3gptf_, d3gptg_, d3gpto_, d3gptp_, d3gptq_, d3gpts_, d3gptt_, d3gptu_
    automated match to d1jd2y_
    complexed with gpt

Details for d3gptd_

PDB Entry: 3gpt (more details), 2.41 Å

PDB Description: Crystal structure of the yeast 20S proteasome in complex with Salinosporamide derivatives: slow substrate ligand
PDB Compounds: (D:) Proteasome component PUP2

SCOPe Domain Sequences for d3gptd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3gptd_ d.153.1.4 (D:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d3gptd_:

Click to download the PDB-style file with coordinates for d3gptd_.
(The format of our PDB-style files is described here.)

Timeline for d3gptd_: