SCOPe 2.08: Domain d3d29d_: 3d29 D:

Lineage for d3d29d_ (3d29 D:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein Proteasome beta subunit (catalytic) [56252] (7 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (202 PDB entries)
   The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)

8. Domain d3d29d_: 3d29 D: [191704]
   Other proteins in same PDB: d3d29a_, d3d29b_, d3d29c2, d3d29c3, d3d29e_, d3d29f_, d3d29g2, d3d29g3, d3d29o_, d3d29p_, d3d29q2, d3d29q3, d3d29s_, d3d29t_, d3d29u2, d3d29u3
   automated match to d1jd2y_
   complexed with feb

Details for d3d29d_

PDB Entry: 3d29, 2.6 Å

PDB Description: proteasome inhibition by fellutamide b

PDB Compounds: (D:) Proteasome component PUP2

SCOPe Domain Sequences for d3d29d_:

Sequence; same for both SEQRES and ATOM records:

>d3d29d_ d.153.1.4 (D:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgegas
geerlmsrpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewh
ssltlkeaellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekea
ae

Timeline for d3d29d_:

• d3d29d_ first appeared in SCOPe 2.02
  
• d3d29d_ appears in SCOPe 2.07