SCOPe 2.06: Family b.82.1.0: automated matches

SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Family b.82.1.0: automated matches

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)

Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
one turn of helix is made by two pairs of antiparallel strands linked with short turns
has appearance of a sandwich of distinct architecture and jelly-roll topology

Superfamily b.82.1: RmlC-like cupins [51182] (25 families)
Family b.82.1.0: automated matches [191354] (1 protein)
not a true family

Protein:

automated matches [190388] (21 species)
not a true protein
1. Species Acinetobacter sp. [TaxId:62977] [188944] (1 PDB entry)
2. Species Bacillus anthracis [TaxId:198094] [226138] (1 PDB entry)
3. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187242] (1 PDB entry)
4. Species Branchiostoma belcheri [TaxId:155462] [189354] (2 PDB entries)
5. Species Clostridium difficile [TaxId:272563] [256193] (1 PDB entry)
6. Species Desulfitobacterium hafniense [TaxId:272564] [187970] (1 PDB entry)
7. Species Escherichia coli [TaxId:562] [225481] (1 PDB entry)
8. Species Granulicella tundricola [TaxId:1198114] [256205] (1 PDB entry)
9. Species Granulicella tundricola [TaxId:940615] [268964] (1 PDB entry)
10. Species Leptotrichia buccalis [TaxId:523794] [256062] (1 PDB entry)
11. Species Mung bean (Vigna radiata) [TaxId:157791] [225082] (1 PDB entry)
12. Species Pinus koraiensis [TaxId:88728] [236190] (1 PDB entry)
13. Species Pseudomonas fluorescens [TaxId:216595] [189073] (3 PDB entries)
14. Species Pseudomonas putida [TaxId:160488] [196877] (3 PDB entries)
15. Species Pumpkin (Cucurbita maxima) [TaxId:3661] [225177] (2 PDB entries)
16. Species Soybean (Glycine max) [TaxId:3847] [225175] (2 PDB entries)
17. Species Streptomyces bikiniensis [TaxId:1896] [193359] (3 PDB entries)
18. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [226353] (2 PDB entries)
19. Species Thermoanaerobacterium thermosaccharolyticum [TaxId:1517] [238466] (4 PDB entries)
20. Species Yersinia enterocolitica [TaxId:393305] [275567] (1 PDB entry)
21. Species Campylobacter jejuni [TaxId:197] [329306] (1 PDB entry)

More info for Family b.82.1.0: automated matches

Timeline for Family b.82.1.0: automated matches:

Family b.82.1.0: automated matches first appeared in SCOPe 2.01
Family b.82.1.0: automated matches appears in SCOPe 2.05