SCOPe 2.06: Family c.1.8.0: automated matches

Lineage for Family c.1.8.0: automated matches

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)
Family c.1.8.0: automated matches [191314] (1 protein)
not a true family

Protein:

automated matches [190075] (90 species)
not a true protein
1. Species Aegilops speltoides [TaxId:58531] [312722] (1 PDB entry)
2. Species Amycolatopsis orientalis [TaxId:31958] [255631] (4 PDB entries)
3. Species Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [189358] (1 PDB entry)
4. Species Aplysia kurodai [TaxId:6501] [194466] (1 PDB entry)
5. Species Aspergillus fumigatus [TaxId:330879] [189460] (1 PDB entry)
6. Species Aspergillus fumigatus [TaxId:451804] [189778] (3 PDB entries)
7. Species Aspergillus fumigatus [TaxId:5085] [189545] (2 PDB entries)
8. Species Aspergillus niger [TaxId:425011] [333178] (6 PDB entries)
9. Species Bacillus agaradhaerens [TaxId:76935] [231408] (2 PDB entries)
10. Species Bacillus anthracis [TaxId:198094] [188951] (1 PDB entry)
11. Species Bacillus clarkii [TaxId:79879] [256320] (1 PDB entry)
12. Species Bacillus licheniformis [TaxId:279010] [312605] (2 PDB entries)
13. Species Bacillus subtilis [TaxId:224308] [226199] (3 PDB entries)
14. Species Bacteroides ovatus [TaxId:28116] [319143] (1 PDB entry)
15. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [188036] (5 PDB entries)
16. Species Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId:5306] [225236] (2 PDB entries)
17. Species Butyrivibrio proteoclasticus [TaxId:515622] [311401] (1 PDB entry)
18. Species Caldicellulosiruptor bescii [TaxId:521460] [256973] (6 PDB entries)
19. Species Caldicellulosiruptor sp. [TaxId:1214564] [311461] (2 PDB entries)
20. Species Capra hircus [TaxId:9925] [313362] (1 PDB entry)
21. Species Cellvibrio japonicus [TaxId:498211] [256228] (2 PDB entries)
22. Species Clostridium cellulovorans [TaxId:1493] [311320] (2 PDB entries)
23. Species Clostridium perfringens [TaxId:195102] [267956] (1 PDB entry)
24. Species Clostridium stercorarium [TaxId:1510] [187615] (1 PDB entry)
25. Species Clostridium thermocellum [TaxId:1515] [267951] (1 PDB entry)
26. Species Clostridium thermocellum [TaxId:203119] [269902] (4 PDB entries)
27. Species Cryptopygus antarcticus [TaxId:187623] [258696] (2 PDB entries)
28. Species Cytophaga hutchinsonii [TaxId:269798] [318773] (1 PDB entry)
29. Species Escherichia coli K-12 [TaxId:83333] [193700] (19 PDB entries)
30. Species Escherichia coli [TaxId:83333] [272137] (8 PDB entries)
31. Species Exiguobacterium antarcticum [TaxId:1087448] [315226] (2 PDB entries)
32. Species Fall armyworm (Spodoptera frugiperda) [TaxId:7108] [279776] (1 PDB entry)
33. Species Fervidobacterium nodosum [TaxId:381764] [233452] (2 PDB entries)
34. Species Fungus (Aspergillus oryzae) [TaxId:5062] [256307] (3 PDB entries)
35. Species Fungus (Fusarium oxysporum) [TaxId:5507] [194927] (1 PDB entry)
36. Species Geobacillus sp. [TaxId:258999] [225393] (1 PDB entry)
37. Species Geobacillus sp. [TaxId:575526] [311783] (1 PDB entry)
38. Species Geobacillus stearothermophilus [TaxId:1422] [319127] (17 PDB entries)
39. Species Halothermothrix orenii [TaxId:373903] [256095] (4 PDB entries)
40. Species Human (Homo sapiens) [TaxId:9606] [226772] (2 PDB entries)
41. Species Humicola grisea [TaxId:5528] [257077] (2 PDB entries)
42. Species Hypocrea jecorina [TaxId:51453] [267875] (1 PDB entry)
43. Species Lactobacillus acidophilus [TaxId:272621] [226447] (1 PDB entry)
44. Species Lactobacillus plantarum [TaxId:1590] [189663] (4 PDB entries)
45. Species Lactobacillus plantarum [TaxId:220668] [193494] (1 PDB entry)
46. Species Malbranchea cinnamomea [TaxId:5041] [226682] (1 PDB entry)
47. Species Micrococcus antarcticus [TaxId:86171] [256149] (1 PDB entry)
48. Species Neotermes koshunensis [TaxId:60586] [189411] (13 PDB entries)
49. Species Oryza sativa [TaxId:39946] [267953] (5 PDB entries)
50. Species Oryza sativa [TaxId:39947] [225407] (27 PDB entries)
51. Species Paenibacillus barcinonensis [TaxId:198119] [273460] (1 PDB entry)
52. Species Paenibacillus macerans [TaxId:44252] [256319] (2 PDB entries)
53. Species Paenibacillus polymyxa [TaxId:1406] [187337] (5 PDB entries)
54. Species Paenibacillus sp. [TaxId:324057] [193799] (3 PDB entries)
55. Species Penicillium canescens [TaxId:5083] [195263] (1 PDB entry)
56. Species Piromyces rhizinflatus [TaxId:73428] [311273] (1 PDB entry)
57. Species Potato (Solanum tuberosum) [TaxId:4113] [193294] (4 PDB entries)
58. Species Prevotella bryantii [TaxId:77095] [276992] (6 PDB entries)
59. Species Pseudomonas aeruginosa [TaxId:208964] [332878] (7 PDB entries)
60. Species Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId:155077] [225524] (4 PDB entries)
61. Species Pseudomonas stutzeri [TaxId:379731] [257915] (1 PDB entry)
62. Species Pyrococcus furiosus [TaxId:2261] [267914] (1 PDB entry)
63. Species Rauvolfia serpentina [TaxId:4060] [189830] (12 PDB entries)
64. Species Rhizomucor miehei [TaxId:4839] [256971] (7 PDB entries)
65. Species Rice (Oryza sativa) [TaxId:4530] [226130] (3 PDB entries)
66. Species Salmonella enterica [TaxId:99287] [194211] (5 PDB entries)
67. Species Scadoxus multiflorus [TaxId:82246] [188826] (7 PDB entries)
68. Species Soil metagenome [TaxId:410658] [328506] (1 PDB entry)
69. Species Streptococcus agalactiae [TaxId:208435] [278390] (2 PDB entries)
70. Species Streptococcus mutans [231714] (2 PDB entries)
71. Species Streptococcus mutans [TaxId:1309] [195139] (3 PDB entries)
72. Species Streptococcus mutans [TaxId:210007] [194595] (4 PDB entries)
73. Species Streptococcus pneumoniae [TaxId:170187] [196905] (2 PDB entries)
74. Species Streptococcus pyogenes [TaxId:1314] [226551] (2 PDB entries)
75. Species Streptococcus pyogenes [TaxId:160490] [314579] (1 PDB entry)
76. Species Sulfolobus tokodaii [TaxId:273063] [225871] (1 PDB entry)
77. Species Talaromyces trachyspermus [TaxId:28566] [258596] (1 PDB entry)
78. Species Tamarindus indica [TaxId:58860] [197290] (2 PDB entries)
79. Species Thermoanaerobacterium saccharolyticum [TaxId:1094508] [196751] (6 PDB entries)
80. Species Thermobifida fusca [TaxId:2021] [187554] (2 PDB entries)
81. Species Thermotoga maritima [TaxId:2336] [186796] (4 PDB entries)
82. Species Thermotoga maritima [TaxId:243274] [226181] (7 PDB entries)
83. Species Thermotoga petrophila [TaxId:390874] [267872] (6 PDB entries)
84. Species Trichoderma harzianum [TaxId:5544] [319250] (3 PDB entries)
85. Species Trichoderma reesei [TaxId:51453] [225935] (5 PDB entries)
86. Species Uncultured bacterium [TaxId:77133] [188624] (10 PDB entries)
87. Species Uncultured organism [TaxId:155900] [341902] (1 PDB entry)
88. Species Unidentified phage [TaxId:38018] [193872] (1 PDB entry)
89. Species Vespula vulgaris [TaxId:7454] [187426] (1 PDB entry)
90. Species Xanthomonas axonopodis [TaxId:190486] [260217] (12 PDB entries)

More info for Family c.1.8.0: automated matches

Timeline for Family c.1.8.0: automated matches:

Family c.1.8.0: automated matches first appeared in SCOPe 2.01
Family c.1.8.0: automated matches appears in SCOPe 2.05
Family c.1.8.0: automated matches appears in SCOPe 2.07
Family c.1.8.0: automated matches appears in the current release, SCOPe 2.08