Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1650133Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 1654451Superfamily d.58.29: Nucleotide cyclase [55073] (3 families) (S)
    common fold is elaborated with additional secondary structures
  5. 1654530Family d.58.29.0: automated matches [191671] (1 protein)
    not a true family
  6. 1654531Protein automated matches [191274] (7 species)
    not a true protein

Species:

  1. 1654532Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [225538] (1 PDB entry)
  2. 1654535Human (Homo sapiens) [TaxId:9606] [225808] (3 PDB entries)
    1. Domains for 2wz1:
      1. 1654536Domain d2wz1a_: 2wz1 A: [207062]
        automated match to d2gvzb1
        complexed with edo
      2. 1654537Domain d2wz1b_: 2wz1 B: [207063]
        automated match to d2gvzb1
        complexed with edo
    2. Domains for 3uvj:
      1. 1654538Domain d3uvjb_: 3uvj B: [217535]
        automated match to d2gvzb1
        complexed with edo, gol
      2. 1654539Domain d3uvjd_: 3uvj D: [217536]
        automated match to d2gvzb1
        complexed with edo, gol
    3. Domain for 4ni2:
  3. 1654541Mycobacterium tuberculosis [225049] (4 PDB entries)
    1. Domain for 1yk9:
    2. Domain for 4p2f:
    3. Domains for 4p2m:
      1. 1654545Domain d4p2ma_: 4p2m A: [260539]
        automated match to d1yk9a_
        complexed with peg, so4
      2. 1654546Domain d4p2mb_: 4p2m B: [259684]
        automated match to d1yk9a_
        complexed with peg, so4
    4. Domain for 4p2x:
  4. 1654547Mycobacterium tuberculosis [TaxId:1773] [259679] (1 PDB entry)
  5. 1654549Pseudomonas aeruginosa [TaxId:287] [189865] (1 PDB entry)
  6. 1654552Ruegeria pomeroyi [TaxId:246200] [196436] (1 PDB entry)
  7. 1654556Synechocystis sp. [TaxId:1148] [196081] (1 PDB entry)

More info for Protein automated matches from d.58.29.0: automated matches

Timeline for Protein automated matches from d.58.29.0: automated matches: