Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2473281Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2473282Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2473463Family c.68.1.6: glucose-1-phosphate thymidylyltransferase [53464] (4 protein domains)
    automatically mapped to Pfam PF00483
  6. 2473594Protein automated matches [191218] (5 species)
    not a true protein

Species:

  1. 2473595Burkholderia vietnamiensis [TaxId:269482] [314952] (3 PDB entries)
    1. Domains for 5ids:
      1. 2473602Domain d5idsa_: 5ids A: [315313]
        automated match to d1fxob_
      2. 2473603Domain d5idsb_: 5ids B: [315442]
        automated match to d1fxob_
      3. 2473604Domain d5idsc_: 5ids C: [314976]
        automated match to d1fxob_
      4. 2473605Domain d5idsd_: 5ids D: [314953]
        automated match to d1fxob_
    2. Domains for 5idt:
      1. 2473606Domain d5idta_: 5idt A: [315141]
        automated match to d1fxob_
        complexed with edo, thm
      2. 2473607Domain d5idtb_: 5idt B: [314954]
        automated match to d1fxob_
        complexed with edo, thm
      3. 2473608Domain d5idtc_: 5idt C: [315097]
        automated match to d1fxob_
        complexed with edo, thm
      4. 2473609Domain d5idtd_: 5idt D: [315035]
        automated match to d1fxob_
        complexed with edo, thm
    3. Domains for 5ify:
      1. 2473596Domain d5ifya_: 5ify A: [315098]
        automated match to d1fxob_
        complexed with trh, ump
      2. 2473597Domain d5ifyb_: 5ify B: [315115]
        automated match to d1fxob_
        complexed with trh, ump
      3. 2473598Domain d5ifyc_: 5ify C: [315250]
        automated match to d1fxob_
        complexed with trh, ump
      4. 2473599Domain d5ifyd_: 5ify D: [315276]
        automated match to d1fxob_
        complexed with trh, ump
      5. 2473600Domain d5ifye_: 5ify E: [315121]
        automated match to d1fxob_
        complexed with trh, ump
      6. 2473601Domain d5ifyf_: 5ify F: [315113]
        automated match to d1fxob_
        complexed with trh, ump
  2. 2473610Pseudomonas aeruginosa [TaxId:287] [329970] (6 PDB entries)
    1. Domains for 5fts:
      1. 2473619Domain d5ftsb_: 5fts B: [329977]
        automated match to d1fxob_
        complexed with cl, mes, p3i
      2. 2473620Domain d5ftsd_: 5fts D: [329981]
        automated match to d1fxob_
        complexed with cl, mes, p3i
    2. Domains for 5ftv:
      1. 2473617Domain d5ftvb_: 5ftv B: [329971]
        automated match to d1fxob_
        complexed with cl, kdt, mes
      2. 2473618Domain d5ftvd_: 5ftv D: [329982]
        automated match to d1fxob_
        complexed with cl, kdt, mes
    3. Domains for 5fu0:
      1. 2473613Domain d5fu0b_: 5fu0 B: [329979]
        automated match to d1fxob_
        complexed with cl, fkh, mes
      2. 2473614Domain d5fu0d_: 5fu0 D: [329980]
        automated match to d1fxob_
        complexed with cl, fkh, mes
    4. Domains for 5fu8:
      1. 2473615Domain d5fu8b_: 5fu8 B: [330000]
        automated match to d1fxob_
        complexed with cl, dh5, mes
      2. 2473616Domain d5fu8d_: 5fu8 D: [329995]
        automated match to d1fxob_
        complexed with cl, dh5, mes
    5. Domains for 5fuh:
      1. 2473611Domain d5fuhb_: 5fuh B: [329998]
        automated match to d1fxob_
        complexed with cl, gol, hkx, mes
      2. 2473612Domain d5fuhd_: 5fuh D: [329978]
        automated match to d1fxob_
        complexed with cl, gol, hkx, mes
    6. Domains for 5fye:
      1. 2473621Domain d5fyeb_: 5fye B: [331687]
        automated match to d1fxob_
        complexed with cl, ld6, mes
      2. 2473622Domain d5fyed_: 5fye D: [331616]
        automated match to d1fxob_
        complexed with cl, ld6, mes
  3. 2473623Pseudomonas aeruginosa, PA01 [TaxId:208964] [193238] (10 PDB entries)
    1. Domains for 3zlk:
      1. 2473640Domain d3zlka1: 3zlk A:2-293 [218313]
        Other proteins in same PDB: d3zlka2
        automated match to d3zllb_
        complexed with cl, y46
      2. 2473641Domain d3zlkb_: 3zlk B: [218314]
        Other proteins in same PDB: d3zlka2
        automated match to d3zllb_
        complexed with cl, y46
      3. 2473642Domain d3zlkc_: 3zlk C: [218315]
        Other proteins in same PDB: d3zlka2
        automated match to d3zllb_
        complexed with cl, y46
      4. 2473643Domain d3zlkd_: 3zlk D: [218316]
        Other proteins in same PDB: d3zlka2
        automated match to d3zllb_
        complexed with cl, y46
    2. Domains for 3zll:
      1. 2473628Domain d3zlla1: 3zll A:2-293 [201338]
        Other proteins in same PDB: d3zlla2, d3zllb2
        automated match to d3zllb_
        complexed with 4wf, cl, gol, mes
      2. 2473629Domain d3zllb1: 3zll B:1-293 [193239]
        Other proteins in same PDB: d3zlla2, d3zllb2
        automated match to d1fxob_
        complexed with 4wf, cl, gol, mes
      3. 2473630Domain d3zllc_: 3zll C: [201339]
        Other proteins in same PDB: d3zlla2, d3zllb2
        automated match to d3zllb_
        complexed with 4wf, cl, gol, mes
      4. 2473631Domain d3zlld_: 3zll D: [201340]
        Other proteins in same PDB: d3zlla2, d3zllb2
        automated match to d3zllb_
        complexed with 4wf, cl, gol, mes
    3. Domains for 4b2w:
      1. 2473652Domain d4b2wa1: 4b2w A:1-293 [197137]
        Other proteins in same PDB: d4b2wa2
        automated match to d1fxob_
        complexed with bz0, cl, gol, mes
      2. 2473653Domain d4b2wb_: 4b2w B: [197135]
        Other proteins in same PDB: d4b2wa2
        automated match to d1fxob_
        complexed with bz0, cl, gol, mes
      3. 2473654Domain d4b2wc_: 4b2w C: [197134]
        Other proteins in same PDB: d4b2wa2
        automated match to d1fxob_
        complexed with bz0, cl, gol, mes
      4. 2473655Domain d4b2wd_: 4b2w D: [197136]
        Other proteins in same PDB: d4b2wa2
        automated match to d1fxob_
        complexed with bz0, cl, gol, mes
    4. Domains for 4b2x:
      1. 2473632Domain d4b2xa1: 4b2x A:1-293 [219255]
        Other proteins in same PDB: d4b2xa2, d4b2xb2
        automated match to d3zllb_
        complexed with cl, mes, niq
      2. 2473633Domain d4b2xb1: 4b2x B:0-293 [219256]
        Other proteins in same PDB: d4b2xa2, d4b2xb2
        automated match to d3zllb_
        complexed with cl, mes, niq
      3. 2473634Domain d4b2xc_: 4b2x C: [219257]
        Other proteins in same PDB: d4b2xa2, d4b2xb2
        automated match to d3zllb_
        complexed with cl, mes, niq
      4. 2473635Domain d4b2xd_: 4b2x D: [219258]
        Other proteins in same PDB: d4b2xa2, d4b2xb2
        automated match to d3zllb_
        complexed with cl, mes, niq
    5. Domains for 4b3u:
      1. 2473624Domain d4b3ua1: 4b3u A:1-293 [219273]
        Other proteins in same PDB: d4b3ua2, d4b3uc2
        automated match to d3zllb_
        complexed with cl, gol, mes, nwl
      2. 2473625Domain d4b3ub_: 4b3u B: [219274]
        Other proteins in same PDB: d4b3ua2, d4b3uc2
        automated match to d3zllb_
        complexed with cl, gol, mes, nwl
      3. 2473626Domain d4b3uc1: 4b3u C:1-293 [219275]
        Other proteins in same PDB: d4b3ua2, d4b3uc2
        automated match to d3zllb_
        complexed with cl, gol, mes, nwl
      4. 2473627Domain d4b3ud_: 4b3u D: [219276]
        Other proteins in same PDB: d4b3ua2, d4b3uc2
        automated match to d3zllb_
        complexed with cl, gol, mes, nwl
    6. Domains for 4b42:
      1. 2473656Domain d4b42a_: 4b42 A: [219279]
        automated match to d3zllb_
        complexed with 942, cl, mes
      2. 2473657Domain d4b42b_: 4b42 B: [219280]
        automated match to d3zllb_
        complexed with 942, cl, mes
      3. 2473658Domain d4b42c_: 4b42 C: [219281]
        automated match to d3zllb_
        complexed with 942, cl, mes
      4. 2473659Domain d4b42d_: 4b42 D: [219282]
        automated match to d3zllb_
        complexed with 942, cl, mes
    7. Domains for 4b4b:
      1. 2473636Domain d4b4ba1: 4b4b A:1-293 [219284]
        Other proteins in same PDB: d4b4ba2
        automated match to d3zllb_
        complexed with cl, gjb, mes
      2. 2473637Domain d4b4bb_: 4b4b B: [219285]
        Other proteins in same PDB: d4b4ba2
        automated match to d3zllb_
        complexed with cl, gjb, mes
      3. 2473638Domain d4b4bc_: 4b4b C: [219286]
        Other proteins in same PDB: d4b4ba2
        automated match to d3zllb_
        complexed with cl, gjb, mes
      4. 2473639Domain d4b4bd_: 4b4b D: [219287]
        Other proteins in same PDB: d4b4ba2
        automated match to d3zllb_
        complexed with cl, gjb, mes
    8. Domains for 4b4g:
      1. 2473660Domain d4b4ga_: 4b4g A: [219289]
        automated match to d3zllb_
        complexed with cl, kkt, mes
      2. 2473661Domain d4b4gb_: 4b4g B: [219290]
        automated match to d3zllb_
        complexed with cl, kkt, mes
      3. 2473662Domain d4b4gc_: 4b4g C: [219291]
        automated match to d3zllb_
        complexed with cl, kkt, mes
      4. 2473663Domain d4b4gd_: 4b4g D: [219292]
        automated match to d3zllb_
        complexed with cl, kkt, mes
    9. Domains for 4b4m:
      1. 2473648Domain d4b4ma1: 4b4m A:1-293 [219308]
        Other proteins in same PDB: d4b4ma2
        automated match to d3zllb_
        complexed with cl, jwt, mes
      2. 2473649Domain d4b4mb_: 4b4m B: [219309]
        Other proteins in same PDB: d4b4ma2
        automated match to d3zllb_
        complexed with cl, jwt, mes
      3. 2473650Domain d4b4mc_: 4b4m C: [219310]
        Other proteins in same PDB: d4b4ma2
        automated match to d3zllb_
        complexed with cl, jwt, mes
      4. 2473651Domain d4b4md_: 4b4m D: [219311]
        Other proteins in same PDB: d4b4ma2
        automated match to d3zllb_
        complexed with cl, jwt, mes
    10. Domains for 4b5b:
      1. 2473644Domain d4b5ba_: 4b5b A: [219332]
        automated match to d3zllb_
        complexed with bbe, cl
      2. 2473645Domain d4b5bb_: 4b5b B: [219333]
        automated match to d3zllb_
        complexed with bbe, cl
      3. 2473646Domain d4b5bc_: 4b5b C: [219334]
        automated match to d3zllb_
        complexed with bbe, cl
      4. 2473647Domain d4b5bd_: 4b5b D: [219335]
        automated match to d3zllb_
        complexed with bbe, cl
  4. 2473664Salmonella typhimurium [TaxId:90371] [189600] (2 PDB entries)
    1. Domains for 3pkp:
      1. 2473669Domain d3pkpa_: 3pkp A: [183809]
        automated match to d1iima_
        complexed with dtp, mg
      2. 2473670Domain d3pkpb_: 3pkp B: [183810]
        automated match to d1iima_
        complexed with dtp, mg
      3. 2473671Domain d3pkpc_: 3pkp C: [183811]
        automated match to d1iima_
        complexed with dtp, mg
      4. 2473672Domain d3pkpd_: 3pkp D: [183812]
        automated match to d1iima_
        complexed with dtp, mg
      5. 2473673Domain d3pkpi_: 3pkp I: [183813]
        automated match to d1iima_
        complexed with dtp, mg
      6. 2473674Domain d3pkpj_: 3pkp J: [183814]
        automated match to d1iima_
        complexed with dtp, mg
      7. 2473675Domain d3pkpk_: 3pkp K: [183815]
        automated match to d1iima_
        complexed with dtp, mg
      8. 2473676Domain d3pkpl_: 3pkp L: [183816]
        automated match to d1iima_
        complexed with dtp, mg
    2. Domains for 3pkq:
      1. 2473665Domain d3pkqa_: 3pkq A: [183817]
        automated match to d1iima_
        complexed with dgt, mg, peg
      2. 2473666Domain d3pkqb_: 3pkq B: [183818]
        automated match to d1iima_
        complexed with dgt, mg, peg
      3. 2473667Domain d3pkqc_: 3pkq C: [183819]
        automated match to d1iima_
        complexed with dgt, mg, peg
      4. 2473668Domain d3pkqd_: 3pkq D: [183820]
        automated match to d1iima_
        complexed with dgt, mg, peg
  5. 3049335Mycobacterium tuberculosis [TaxId:83332] [349397] (2 PDB entries)
    1. Domains for 6b5e:
      1. 3049336Domain d6b5eh_: 6b5e H: [349398]
        automated match to d4ho4a_
        complexed with cl, dau, edo, mg, na, tyd
      2. 3049338Domain d6b5ea_: 6b5e A: [349400]
        automated match to d4ho4a_
        complexed with cl, dau, edo, mg, na, tyd
      3. 3049366Domain d6b5eg_: 6b5e G: [349428]
        automated match to d4ho4a_
        complexed with cl, dau, edo, mg, na, tyd
      4. 3049384Domain d6b5ec_: 6b5e C: [349446]
        automated match to d4ho4a_
        complexed with cl, dau, edo, mg, na, tyd
      5. 3049416Domain d6b5ed_: 6b5e D: [349478]
        automated match to d4ho4a_
        complexed with cl, dau, edo, mg, na, tyd
      6. 3049462Domain d6b5ef_: 6b5e F: [349524]
        automated match to d4ho4a_
        complexed with cl, dau, edo, mg, na, tyd
      7. 3049510Domain d6b5ee_: 6b5e E: [349572]
        automated match to d4ho4a_
        complexed with cl, dau, edo, mg, na, tyd
      8. 3049594Domain d6b5eb_: 6b5e B: [349656]
        automated match to d4ho4a_
        complexed with cl, dau, edo, mg, na, tyd
    2. Domains for 6b5k:
      1. 3049952Domain d6b5ka_: 6b5k A: [350014]
        automated match to d4ho4a_
        complexed with edo, mg, ttp, tyd
      2. 3049982Domain d6b5kb_: 6b5k B: [350044]
        automated match to d4ho4a_
        complexed with edo, mg, ttp, tyd

More info for Protein automated matches from c.68.1.6: glucose-1-phosphate thymidylyltransferase

Timeline for Protein automated matches from c.68.1.6: glucose-1-phosphate thymidylyltransferase: