Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2133075Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2133076Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2133255Family c.68.1.6: glucose-1-phosphate thymidylyltransferase [53464] (4 protein domains)
    automatically mapped to Pfam PF00483
  6. 2133386Protein automated matches [191218] (4 species)
    not a true protein

Species:

  1. 2133387Pseudomonas aeruginosa, PA01 [TaxId:208964] [193238] (10 PDB entries)
    1. Domains for 3zlk:
      1. 2133400Domain d3zlka1: 3zlk A:2-293 [218313]
        Other proteins in same PDB: d3zlka2
        automated match to d3zllb_
        complexed with cl, y46
      2. 2133401Domain d3zlkb_: 3zlk B: [218314]
        Other proteins in same PDB: d3zlka2
        automated match to d3zllb_
        complexed with cl, y46
      3. 2133402Domain d3zlkc_: 3zlk C: [218315]
        Other proteins in same PDB: d3zlka2
        automated match to d3zllb_
        complexed with cl, y46
      4. 2133403Domain d3zlkd_: 3zlk D: [218316]
        Other proteins in same PDB: d3zlka2
        automated match to d3zllb_
        complexed with cl, y46
    2. Domains for 3zll:
      1. 2133396Domain d3zlla1: 3zll A:2-293 [201338]
        Other proteins in same PDB: d3zlla2, d3zllb2
        automated match to d3zllb_
        complexed with 4wf, cl, gol, mes
      2. 2133397Domain d3zllb1: 3zll B:1-293 [193239]
        Other proteins in same PDB: d3zlla2, d3zllb2
        automated match to d1fxob_
        complexed with 4wf, cl, gol, mes
      3. 2133398Domain d3zllc_: 3zll C: [201339]
        Other proteins in same PDB: d3zlla2, d3zllb2
        automated match to d3zllb_
        complexed with 4wf, cl, gol, mes
      4. 2133399Domain d3zlld_: 3zll D: [201340]
        Other proteins in same PDB: d3zlla2, d3zllb2
        automated match to d3zllb_
        complexed with 4wf, cl, gol, mes
    3. Domains for 4b2w:
      1. 2133412Domain d4b2wa1: 4b2w A:1-293 [197137]
        Other proteins in same PDB: d4b2wa2
        automated match to d1fxob_
        complexed with bz0, cl, gol, mes
      2. 2133413Domain d4b2wb_: 4b2w B: [197135]
        Other proteins in same PDB: d4b2wa2
        automated match to d1fxob_
        complexed with bz0, cl, gol, mes
      3. 2133414Domain d4b2wc_: 4b2w C: [197134]
        Other proteins in same PDB: d4b2wa2
        automated match to d1fxob_
        complexed with bz0, cl, gol, mes
      4. 2133415Domain d4b2wd_: 4b2w D: [197136]
        Other proteins in same PDB: d4b2wa2
        automated match to d1fxob_
        complexed with bz0, cl, gol, mes
    4. Domains for 4b2x:
      1. 2133388Domain d4b2xa1: 4b2x A:1-293 [219255]
        Other proteins in same PDB: d4b2xa2, d4b2xb2
        automated match to d3zllb_
        complexed with cl, mes, niq
      2. 2133389Domain d4b2xb1: 4b2x B:0-293 [219256]
        Other proteins in same PDB: d4b2xa2, d4b2xb2
        automated match to d3zllb_
        complexed with cl, mes, niq
      3. 2133390Domain d4b2xc_: 4b2x C: [219257]
        Other proteins in same PDB: d4b2xa2, d4b2xb2
        automated match to d3zllb_
        complexed with cl, mes, niq
      4. 2133391Domain d4b2xd_: 4b2x D: [219258]
        Other proteins in same PDB: d4b2xa2, d4b2xb2
        automated match to d3zllb_
        complexed with cl, mes, niq
    5. Domains for 4b3u:
      1. 2133392Domain d4b3ua1: 4b3u A:1-293 [219273]
        Other proteins in same PDB: d4b3ua2, d4b3uc2
        automated match to d3zllb_
        complexed with cl, gol, mes, nwl
      2. 2133393Domain d4b3ub_: 4b3u B: [219274]
        Other proteins in same PDB: d4b3ua2, d4b3uc2
        automated match to d3zllb_
        complexed with cl, gol, mes, nwl
      3. 2133394Domain d4b3uc1: 4b3u C:1-293 [219275]
        Other proteins in same PDB: d4b3ua2, d4b3uc2
        automated match to d3zllb_
        complexed with cl, gol, mes, nwl
      4. 2133395Domain d4b3ud_: 4b3u D: [219276]
        Other proteins in same PDB: d4b3ua2, d4b3uc2
        automated match to d3zllb_
        complexed with cl, gol, mes, nwl
    6. Domains for 4b42:
      1. 2133424Domain d4b42a_: 4b42 A: [219279]
        automated match to d3zllb_
        complexed with 942, cl, mes
      2. 2133425Domain d4b42b_: 4b42 B: [219280]
        automated match to d3zllb_
        complexed with 942, cl, mes
      3. 2133426Domain d4b42c_: 4b42 C: [219281]
        automated match to d3zllb_
        complexed with 942, cl, mes
      4. 2133427Domain d4b42d_: 4b42 D: [219282]
        automated match to d3zllb_
        complexed with 942, cl, mes
    7. Domains for 4b4b:
      1. 2133408Domain d4b4ba1: 4b4b A:1-293 [219284]
        Other proteins in same PDB: d4b4ba2
        automated match to d3zllb_
        complexed with cl, gjb, mes
      2. 2133409Domain d4b4bb_: 4b4b B: [219285]
        Other proteins in same PDB: d4b4ba2
        automated match to d3zllb_
        complexed with cl, gjb, mes
      3. 2133410Domain d4b4bc_: 4b4b C: [219286]
        Other proteins in same PDB: d4b4ba2
        automated match to d3zllb_
        complexed with cl, gjb, mes
      4. 2133411Domain d4b4bd_: 4b4b D: [219287]
        Other proteins in same PDB: d4b4ba2
        automated match to d3zllb_
        complexed with cl, gjb, mes
    8. Domains for 4b4g:
      1. 2133420Domain d4b4ga_: 4b4g A: [219289]
        automated match to d3zllb_
        complexed with cl, kkt, mes
      2. 2133421Domain d4b4gb_: 4b4g B: [219290]
        automated match to d3zllb_
        complexed with cl, kkt, mes
      3. 2133422Domain d4b4gc_: 4b4g C: [219291]
        automated match to d3zllb_
        complexed with cl, kkt, mes
      4. 2133423Domain d4b4gd_: 4b4g D: [219292]
        automated match to d3zllb_
        complexed with cl, kkt, mes
    9. Domains for 4b4m:
      1. 2133416Domain d4b4ma1: 4b4m A:1-293 [219308]
        Other proteins in same PDB: d4b4ma2
        automated match to d3zllb_
        complexed with cl, jwt, mes
      2. 2133417Domain d4b4mb_: 4b4m B: [219309]
        Other proteins in same PDB: d4b4ma2
        automated match to d3zllb_
        complexed with cl, jwt, mes
      3. 2133418Domain d4b4mc_: 4b4m C: [219310]
        Other proteins in same PDB: d4b4ma2
        automated match to d3zllb_
        complexed with cl, jwt, mes
      4. 2133419Domain d4b4md_: 4b4m D: [219311]
        Other proteins in same PDB: d4b4ma2
        automated match to d3zllb_
        complexed with cl, jwt, mes
    10. Domains for 4b5b:
      1. 2133404Domain d4b5ba_: 4b5b A: [219332]
        automated match to d3zllb_
        complexed with bbe, cl
      2. 2133405Domain d4b5bb_: 4b5b B: [219333]
        automated match to d3zllb_
        complexed with bbe, cl
      3. 2133406Domain d4b5bc_: 4b5b C: [219334]
        automated match to d3zllb_
        complexed with bbe, cl
      4. 2133407Domain d4b5bd_: 4b5b D: [219335]
        automated match to d3zllb_
        complexed with bbe, cl
  2. 2133428Salmonella typhimurium [TaxId:90371] [189600] (2 PDB entries)
    1. Domains for 3pkp:
      1. 2133433Domain d3pkpa_: 3pkp A: [183809]
        automated match to d1iima_
        complexed with dtp, mg
      2. 2133434Domain d3pkpb_: 3pkp B: [183810]
        automated match to d1iima_
        complexed with dtp, mg
      3. 2133435Domain d3pkpc_: 3pkp C: [183811]
        automated match to d1iima_
        complexed with dtp, mg
      4. 2133436Domain d3pkpd_: 3pkp D: [183812]
        automated match to d1iima_
        complexed with dtp, mg
      5. 2133437Domain d3pkpi_: 3pkp I: [183813]
        automated match to d1iima_
        complexed with dtp, mg
      6. 2133438Domain d3pkpj_: 3pkp J: [183814]
        automated match to d1iima_
        complexed with dtp, mg
      7. 2133439Domain d3pkpk_: 3pkp K: [183815]
        automated match to d1iima_
        complexed with dtp, mg
      8. 2133440Domain d3pkpl_: 3pkp L: [183816]
        automated match to d1iima_
        complexed with dtp, mg
    2. Domains for 3pkq:
      1. 2133429Domain d3pkqa_: 3pkq A: [183817]
        automated match to d1iima_
        complexed with dgt, mg, peg
      2. 2133430Domain d3pkqb_: 3pkq B: [183818]
        automated match to d1iima_
        complexed with dgt, mg, peg
      3. 2133431Domain d3pkqc_: 3pkq C: [183819]
        automated match to d1iima_
        complexed with dgt, mg, peg
      4. 2133432Domain d3pkqd_: 3pkq D: [183820]
        automated match to d1iima_
        complexed with dgt, mg, peg
  3. 2271651Burkholderia vietnamiensis [TaxId:269482] [314952] (3 PDB entries)
    1. Domains for 5ids:
      1. 2271652Domain d5idsd_: 5ids D: [314953]
        automated match to d1fxob_
      2. 2271675Domain d5idsc_: 5ids C: [314976]
        automated match to d1fxob_
      3. 2272012Domain d5idsa_: 5ids A: [315313]
        automated match to d1fxob_
      4. 2272141Domain d5idsb_: 5ids B: [315442]
        automated match to d1fxob_
    2. Domains for 5idt:
      1. 2271653Domain d5idtb_: 5idt B: [314954]
        automated match to d1fxob_
        complexed with edo, thm
      2. 2271734Domain d5idtd_: 5idt D: [315035]
        automated match to d1fxob_
        complexed with edo, thm
      3. 2271796Domain d5idtc_: 5idt C: [315097]
        automated match to d1fxob_
        complexed with edo, thm
      4. 2271840Domain d5idta_: 5idt A: [315141]
        automated match to d1fxob_
        complexed with edo, thm
    3. Domains for 5ify:
      1. 2271797Domain d5ifya_: 5ify A: [315098]
        automated match to d1fxob_
        complexed with trh, ump
      2. 2271812Domain d5ifyf_: 5ify F: [315113]
        automated match to d1fxob_
        complexed with trh, ump
      3. 2271814Domain d5ifyb_: 5ify B: [315115]
        automated match to d1fxob_
        complexed with trh, ump
      4. 2271820Domain d5ifye_: 5ify E: [315121]
        automated match to d1fxob_
        complexed with trh, ump
      5. 2271949Domain d5ifyc_: 5ify C: [315250]
        automated match to d1fxob_
        complexed with trh, ump
      6. 2271975Domain d5ifyd_: 5ify D: [315276]
        automated match to d1fxob_
        complexed with trh, ump
  4. 2286669Pseudomonas aeruginosa [TaxId:287] [329970] (6 PDB entries)
    1. Domains for 5fts:
      1. 2286676Domain d5ftsb_: 5fts B: [329977]
        automated match to d1fxob_
        complexed with cl, mes, p3i
      2. 2286680Domain d5ftsd_: 5fts D: [329981]
        automated match to d1fxob_
        complexed with cl, mes, p3i
    2. Domains for 5ftv:
      1. 2286670Domain d5ftvb_: 5ftv B: [329971]
        automated match to d1fxob_
        complexed with cl, kdt, mes
      2. 2286681Domain d5ftvd_: 5ftv D: [329982]
        automated match to d1fxob_
        complexed with cl, kdt, mes
    3. Domains for 5fu0:
      1. 2286678Domain d5fu0b_: 5fu0 B: [329979]
        automated match to d1fxob_
        complexed with cl, fkh, mes
      2. 2286679Domain d5fu0d_: 5fu0 D: [329980]
        automated match to d1fxob_
        complexed with cl, fkh, mes
    4. Domains for 5fu8:
      1. 2286694Domain d5fu8d_: 5fu8 D: [329995]
        automated match to d1fxob_
        complexed with cl, dh5, mes
      2. 2286699Domain d5fu8b_: 5fu8 B: [330000]
        automated match to d1fxob_
        complexed with cl, dh5, mes
    5. Domains for 5fuh:
      1. 2286677Domain d5fuhd_: 5fuh D: [329978]
        automated match to d1fxob_
        complexed with cl, gol, hkx, mes
      2. 2286697Domain d5fuhb_: 5fuh B: [329998]
        automated match to d1fxob_
        complexed with cl, gol, hkx, mes
    6. Domains for 5fye:
      1. 2288315Domain d5fyed_: 5fye D: [331616]
        automated match to d1fxob_
        complexed with cl, ld6, mes
      2. 2288386Domain d5fyeb_: 5fye B: [331687]
        automated match to d1fxob_
        complexed with cl, ld6, mes

More info for Protein automated matches from c.68.1.6: glucose-1-phosphate thymidylyltransferase

Timeline for Protein automated matches from c.68.1.6: glucose-1-phosphate thymidylyltransferase: