SCOPe 2.06: Protein: automated matches

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Lineage for Protein: automated matches

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)
Family c.68.1.6: glucose-1-phosphate thymidylyltransferase [53464] (4 protein domains)
automatically mapped to Pfam PF00483
Protein automated matches [191218] (4 species)
not a true protein

Species:

Pseudomonas aeruginosa, PA01 [TaxId:208964] [193238] (10 PDB entries)
1. Domains for 3zlk:
  1. Domain d3zlka1: 3zlk A:2-293 [218313]
    Other proteins in same PDB: d3zlka2
    automated match to d3zllb_
    complexed with cl, y46
  2. Domain d3zlkb_: 3zlk B: [218314]
    Other proteins in same PDB: d3zlka2
    automated match to d3zllb_
    complexed with cl, y46
  3. Domain d3zlkc_: 3zlk C: [218315]
    Other proteins in same PDB: d3zlka2
    automated match to d3zllb_
    complexed with cl, y46
  4. Domain d3zlkd_: 3zlk D: [218316]
    Other proteins in same PDB: d3zlka2
    automated match to d3zllb_
    complexed with cl, y46
2. Domains for 3zll:
  1. Domain d3zlla1: 3zll A:2-293 [201338]
    Other proteins in same PDB: d3zlla2, d3zllb2
    automated match to d3zllb_
    complexed with 4wf, cl, gol, mes
  2. Domain d3zllb1: 3zll B:1-293 [193239]
    Other proteins in same PDB: d3zlla2, d3zllb2
    automated match to d1fxob_
    complexed with 4wf, cl, gol, mes
  3. Domain d3zllc_: 3zll C: [201339]
    Other proteins in same PDB: d3zlla2, d3zllb2
    automated match to d3zllb_
    complexed with 4wf, cl, gol, mes
  4. Domain d3zlld_: 3zll D: [201340]
    Other proteins in same PDB: d3zlla2, d3zllb2
    automated match to d3zllb_
    complexed with 4wf, cl, gol, mes
3. Domains for 4b2w:
  1. Domain d4b2wa1: 4b2w A:1-293 [197137]
    Other proteins in same PDB: d4b2wa2
    automated match to d1fxob_
    complexed with bz0, cl, gol, mes
  2. Domain d4b2wb_: 4b2w B: [197135]
    Other proteins in same PDB: d4b2wa2
    automated match to d1fxob_
    complexed with bz0, cl, gol, mes
  3. Domain d4b2wc_: 4b2w C: [197134]
    Other proteins in same PDB: d4b2wa2
    automated match to d1fxob_
    complexed with bz0, cl, gol, mes
  4. Domain d4b2wd_: 4b2w D: [197136]
    Other proteins in same PDB: d4b2wa2
    automated match to d1fxob_
    complexed with bz0, cl, gol, mes
4. Domains for 4b2x:
  1. Domain d4b2xa1: 4b2x A:1-293 [219255]
    Other proteins in same PDB: d4b2xa2, d4b2xb2
    automated match to d3zllb_
    complexed with cl, mes, niq
  2. Domain d4b2xb1: 4b2x B:0-293 [219256]
    Other proteins in same PDB: d4b2xa2, d4b2xb2
    automated match to d3zllb_
    complexed with cl, mes, niq
  3. Domain d4b2xc_: 4b2x C: [219257]
    Other proteins in same PDB: d4b2xa2, d4b2xb2
    automated match to d3zllb_
    complexed with cl, mes, niq
  4. Domain d4b2xd_: 4b2x D: [219258]
    Other proteins in same PDB: d4b2xa2, d4b2xb2
    automated match to d3zllb_
    complexed with cl, mes, niq
5. Domains for 4b3u:
  1. Domain d4b3ua1: 4b3u A:1-293 [219273]
    Other proteins in same PDB: d4b3ua2, d4b3uc2
    automated match to d3zllb_
    complexed with cl, gol, mes, nwl
  2. Domain d4b3ub_: 4b3u B: [219274]
    Other proteins in same PDB: d4b3ua2, d4b3uc2
    automated match to d3zllb_
    complexed with cl, gol, mes, nwl
  3. Domain d4b3uc1: 4b3u C:1-293 [219275]
    Other proteins in same PDB: d4b3ua2, d4b3uc2
    automated match to d3zllb_
    complexed with cl, gol, mes, nwl
  4. Domain d4b3ud_: 4b3u D: [219276]
    Other proteins in same PDB: d4b3ua2, d4b3uc2
    automated match to d3zllb_
    complexed with cl, gol, mes, nwl
6. Domains for 4b42:
  1. Domain d4b42a_: 4b42 A: [219279]
    automated match to d3zllb_
    complexed with 942, cl, mes
  2. Domain d4b42b_: 4b42 B: [219280]
    automated match to d3zllb_
    complexed with 942, cl, mes
  3. Domain d4b42c_: 4b42 C: [219281]
    automated match to d3zllb_
    complexed with 942, cl, mes
  4. Domain d4b42d_: 4b42 D: [219282]
    automated match to d3zllb_
    complexed with 942, cl, mes
7. Domains for 4b4b:
  1. Domain d4b4ba1: 4b4b A:1-293 [219284]
    Other proteins in same PDB: d4b4ba2
    automated match to d3zllb_
    complexed with cl, gjb, mes
  2. Domain d4b4bb_: 4b4b B: [219285]
    Other proteins in same PDB: d4b4ba2
    automated match to d3zllb_
    complexed with cl, gjb, mes
  3. Domain d4b4bc_: 4b4b C: [219286]
    Other proteins in same PDB: d4b4ba2
    automated match to d3zllb_
    complexed with cl, gjb, mes
  4. Domain d4b4bd_: 4b4b D: [219287]
    Other proteins in same PDB: d4b4ba2
    automated match to d3zllb_
    complexed with cl, gjb, mes
8. Domains for 4b4g:
  1. Domain d4b4ga_: 4b4g A: [219289]
    automated match to d3zllb_
    complexed with cl, kkt, mes
  2. Domain d4b4gb_: 4b4g B: [219290]
    automated match to d3zllb_
    complexed with cl, kkt, mes
  3. Domain d4b4gc_: 4b4g C: [219291]
    automated match to d3zllb_
    complexed with cl, kkt, mes
  4. Domain d4b4gd_: 4b4g D: [219292]
    automated match to d3zllb_
    complexed with cl, kkt, mes
9. Domains for 4b4m:
  1. Domain d4b4ma1: 4b4m A:1-293 [219308]
    Other proteins in same PDB: d4b4ma2
    automated match to d3zllb_
    complexed with cl, jwt, mes
  2. Domain d4b4mb_: 4b4m B: [219309]
    Other proteins in same PDB: d4b4ma2
    automated match to d3zllb_
    complexed with cl, jwt, mes
  3. Domain d4b4mc_: 4b4m C: [219310]
    Other proteins in same PDB: d4b4ma2
    automated match to d3zllb_
    complexed with cl, jwt, mes
  4. Domain d4b4md_: 4b4m D: [219311]
    Other proteins in same PDB: d4b4ma2
    automated match to d3zllb_
    complexed with cl, jwt, mes
10. Domains for 4b5b:
  1. Domain d4b5ba_: 4b5b A: [219332]
    automated match to d3zllb_
    complexed with bbe, cl
  2. Domain d4b5bb_: 4b5b B: [219333]
    automated match to d3zllb_
    complexed with bbe, cl
  3. Domain d4b5bc_: 4b5b C: [219334]
    automated match to d3zllb_
    complexed with bbe, cl
  4. Domain d4b5bd_: 4b5b D: [219335]
    automated match to d3zllb_
    complexed with bbe, cl
Salmonella typhimurium [TaxId:90371] [189600] (2 PDB entries)
1. Domains for 3pkp:
  1. Domain d3pkpa_: 3pkp A: [183809]
    automated match to d1iima_
    complexed with dtp, mg
  2. Domain d3pkpb_: 3pkp B: [183810]
    automated match to d1iima_
    complexed with dtp, mg
  3. Domain d3pkpc_: 3pkp C: [183811]
    automated match to d1iima_
    complexed with dtp, mg
  4. Domain d3pkpd_: 3pkp D: [183812]
    automated match to d1iima_
    complexed with dtp, mg
  5. Domain d3pkpi_: 3pkp I: [183813]
    automated match to d1iima_
    complexed with dtp, mg
  6. Domain d3pkpj_: 3pkp J: [183814]
    automated match to d1iima_
    complexed with dtp, mg
  7. Domain d3pkpk_: 3pkp K: [183815]
    automated match to d1iima_
    complexed with dtp, mg
  8. Domain d3pkpl_: 3pkp L: [183816]
    automated match to d1iima_
    complexed with dtp, mg
2. Domains for 3pkq:
  1. Domain d3pkqa_: 3pkq A: [183817]
    automated match to d1iima_
    complexed with dgt, mg, peg
  2. Domain d3pkqb_: 3pkq B: [183818]
    automated match to d1iima_
    complexed with dgt, mg, peg
  3. Domain d3pkqc_: 3pkq C: [183819]
    automated match to d1iima_
    complexed with dgt, mg, peg
  4. Domain d3pkqd_: 3pkq D: [183820]
    automated match to d1iima_
    complexed with dgt, mg, peg
Burkholderia vietnamiensis [TaxId:269482] [314952] (3 PDB entries)
1. Domains for 5ids:
  1. Domain d5idsd_: 5ids D: [314953]
    automated match to d1fxob_
  2. Domain d5idsc_: 5ids C: [314976]
    automated match to d1fxob_
  3. Domain d5idsa_: 5ids A: [315313]
    automated match to d1fxob_
  4. Domain d5idsb_: 5ids B: [315442]
    automated match to d1fxob_
2. Domains for 5idt:
  1. Domain d5idtb_: 5idt B: [314954]
    automated match to d1fxob_
    complexed with edo, thm
  2. Domain d5idtd_: 5idt D: [315035]
    automated match to d1fxob_
    complexed with edo, thm
  3. Domain d5idtc_: 5idt C: [315097]
    automated match to d1fxob_
    complexed with edo, thm
  4. Domain d5idta_: 5idt A: [315141]
    automated match to d1fxob_
    complexed with edo, thm
3. Domains for 5ify:
  1. Domain d5ifya_: 5ify A: [315098]
    automated match to d1fxob_
    complexed with trh, ump
  2. Domain d5ifyf_: 5ify F: [315113]
    automated match to d1fxob_
    complexed with trh, ump
  3. Domain d5ifyb_: 5ify B: [315115]
    automated match to d1fxob_
    complexed with trh, ump
  4. Domain d5ifye_: 5ify E: [315121]
    automated match to d1fxob_
    complexed with trh, ump
  5. Domain d5ifyc_: 5ify C: [315250]
    automated match to d1fxob_
    complexed with trh, ump
  6. Domain d5ifyd_: 5ify D: [315276]
    automated match to d1fxob_
    complexed with trh, ump
Pseudomonas aeruginosa [TaxId:287] [329970] (6 PDB entries)
1. Domains for 5fts:
  1. Domain d5ftsb_: 5fts B: [329977]
    automated match to d1fxob_
    complexed with cl, mes, p3i
  2. Domain d5ftsd_: 5fts D: [329981]
    automated match to d1fxob_
    complexed with cl, mes, p3i
2. Domains for 5ftv:
  1. Domain d5ftvb_: 5ftv B: [329971]
    automated match to d1fxob_
    complexed with cl, kdt, mes
  2. Domain d5ftvd_: 5ftv D: [329982]
    automated match to d1fxob_
    complexed with cl, kdt, mes
3. Domains for 5fu0:
  1. Domain d5fu0b_: 5fu0 B: [329979]
    automated match to d1fxob_
    complexed with cl, fkh, mes
  2. Domain d5fu0d_: 5fu0 D: [329980]
    automated match to d1fxob_
    complexed with cl, fkh, mes
4. Domains for 5fu8:
  1. Domain d5fu8d_: 5fu8 D: [329995]
    automated match to d1fxob_
    complexed with cl, dh5, mes
  2. Domain d5fu8b_: 5fu8 B: [330000]
    automated match to d1fxob_
    complexed with cl, dh5, mes
5. Domains for 5fuh:
  1. Domain d5fuhd_: 5fuh D: [329978]
    automated match to d1fxob_
    complexed with cl, gol, hkx, mes
  2. Domain d5fuhb_: 5fuh B: [329998]
    automated match to d1fxob_
    complexed with cl, gol, hkx, mes
6. Domains for 5fye:
  1. Domain d5fyed_: 5fye D: [331616]
    automated match to d1fxob_
    complexed with cl, ld6, mes
  2. Domain d5fyeb_: 5fye B: [331687]
    automated match to d1fxob_
    complexed with cl, ld6, mes

More info for Protein automated matches from c.68.1.6: glucose-1-phosphate thymidylyltransferase

Timeline for Protein automated matches from c.68.1.6: glucose-1-phosphate thymidylyltransferase:

Protein automated matches from c.68.1.6: glucose-1-phosphate thymidylyltransferase first appeared in SCOPe 2.01
Protein automated matches from c.68.1.6: glucose-1-phosphate thymidylyltransferase appears in SCOPe 2.05