Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1502431Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 1502432Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 1503538Family a.123.1.0: automated matches [191623] (1 protein)
    not a true family
  6. 1503539Protein automated matches [191142] (5 species)
    not a true protein

Species:

  1. 1503540Crassostrea gigas [TaxId:29159] [226087] (1 PDB entry)
  2. 1503545Fruit fly (Drosophila melanogaster) [TaxId:7227] [189702] (1 PDB entry)
  3. 1503547Human (Homo sapiens) [TaxId:9606] [189274] (8 PDB entries)
    1. Domains for 3b0w:
      1. 1503551Domain d3b0wa_: 3b0w A: [199003]
        automated match to d3b0wb_
        complexed with dgx
      2. 1503552Domain d3b0wb_: 3b0w B: [193702]
        automated match to d3l0la_
        complexed with dgx
    2. Domain for 3cjw:
    3. Domain for 3l0j:
    4. Domains for 3l0l:
      1. 1503549Domain d3l0la_: 3l0l A: [179842]
        automated match to d1n83a_
        protein/DNA complex; complexed with hc3
      2. 1503550Domain d3l0lb_: 3l0l B: [179843]
        automated match to d1n83a_
        protein/DNA complex; complexed with hc3
    5. Domain for 3tx7:
    6. Domain for 4j5w:
    7. Domains for 4nb6:
      1. 1503557Domain d4nb6a_: 4nb6 A: [229950]
        automated match to d4nb6b_
        complexed with 444
      2. 1503558Domain d4nb6b_: 4nb6 B: [229343]
        automated match to d3l0la_
        complexed with 444
    8. Domain for 4qm0:
  4. 1503559Mouse (Mus musculus) [TaxId:10090] [255824] (1 PDB entry)
  5. 1503561Tunicate (Polyandrocarpa misakiensis) [TaxId:7723] [225459] (1 PDB entry)

More info for Protein automated matches from a.123.1.0: automated matches

Timeline for Protein automated matches from a.123.1.0: automated matches: