Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2006336Fold a.118: alpha-alpha superhelix [48370] (25 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2007623Superfamily a.118.9: ENTH/VHS domain [48464] (5 families) (S)
  5. 2007726Family a.118.9.0: automated matches [191620] (1 protein)
    not a true family
  6. 2007727Protein automated matches [191137] (5 species)
    not a true protein

Species:

  1. 2007728Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [311220] (1 PDB entry)
  2. 2007730Human (Homo sapiens) [TaxId:9606] [189251] (7 PDB entries)
    1. Domain for 1x5b:
    2. Domain for 2l0t:
    3. Domains for 3ldz:
      1. 2007738Domain d3ldza_: 3ldz A: [180200]
        Other proteins in same PDB: d3ldze_, d3ldzf_, d3ldzg_
        automated match to d1elka_
      2. 2007739Domain d3ldzb_: 3ldz B: [180201]
        Other proteins in same PDB: d3ldze_, d3ldzf_, d3ldzg_
        automated match to d1elka_
      3. 2007740Domain d3ldzc_: 3ldz C: [180202]
        Other proteins in same PDB: d3ldze_, d3ldzf_, d3ldzg_
        automated match to d1elka_
      4. 2007741Domain d3ldzd_: 3ldz D: [180203]
        Other proteins in same PDB: d3ldze_, d3ldzf_, d3ldzg_
        automated match to d1elka_
    4. Domains for 3rru:
      1. 2007734Domain d3rrua_: 3rru A: [249201]
        automated match to d1elka_
      2. 2007735Domain d3rrub_: 3rru B: [249202]
        automated match to d1elka_
    5. Domain for 3zyq:
    6. Domain for 4avx:
    7. Domain for 4flb:
  3. 2007742Norway rat (Rattus norvegicus) [TaxId:10116] [226790] (2 PDB entries)
    1. Domains for 3zyk:
      1. 2007745Domain d3zyka1: 3zyk A:20-148 [218583]
        Other proteins in same PDB: d3zyka2, d3zykb2
        automated match to d1hx8a2
      2. 2007746Domain d3zykb1: 3zyk B:18-148 [218585]
        Other proteins in same PDB: d3zyka2, d3zykb2
        automated match to d1hx8a2
    2. Domains for 3zyl:
      1. 2007743Domain d3zyla1: 3zyl A:5-148 [218587]
        Other proteins in same PDB: d3zyla2, d3zylb2
        automated match to d1hx8a2
      2. 2007744Domain d3zylb1: 3zyl B:18-148 [218589]
        Other proteins in same PDB: d3zyla2, d3zylb2
        automated match to d1hx8a2
  4. 2280409Saccharomyces cerevisiae [TaxId:559292] [323710] (1 PDB entry)
  5. 2285435Candida albicans [TaxId:237561] [328736] (1 PDB entry)

More info for Protein automated matches from a.118.9.0: automated matches

Timeline for Protein automated matches from a.118.9.0: automated matches: