Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2129158Fold c.65: Formyltransferase [53327] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214567; strand 6 is antiparallel to the rest
  4. 2129159Superfamily c.65.1: Formyltransferase [53328] (2 families) (S)
  5. 2129260Family c.65.1.0: automated matches [191608] (1 protein)
    not a true family
  6. 2129261Protein automated matches [191110] (11 species)
    not a true protein

Species:

  1. 2129262Anaplasma phagocytophilum [TaxId:212042] [189161] (1 PDB entry)
  2. 2129267Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [226570] (2 PDB entries)
    1. Domains for 3rfo:
      1. 2129272Domain d3rfoa1: 3rfo A:1-204 [306448]
        Other proteins in same PDB: d3rfoa2, d3rfoa3, d3rfob2, d3rfob3, d3rfoc2, d3rfoc3, d3rfod2, d3rfod3
        automated match to d4iqfa1
        complexed with gol, pge, so4
      2. 2129273Domain d3rfob1: 3rfo B:1-204 [306451]
        Other proteins in same PDB: d3rfoa2, d3rfoa3, d3rfob2, d3rfob3, d3rfoc2, d3rfoc3, d3rfod2, d3rfod3
        automated match to d4iqfa1
        complexed with gol, pge, so4
      3. 2129274Domain d3rfoc1: 3rfo C:1-204 [306454]
        Other proteins in same PDB: d3rfoa2, d3rfoa3, d3rfob2, d3rfob3, d3rfoc2, d3rfoc3, d3rfod2, d3rfod3
        automated match to d4iqfa1
        complexed with gol, pge, so4
      4. 2129275Domain d3rfod1: 3rfo D:1-204 [306457]
        Other proteins in same PDB: d3rfoa2, d3rfoa3, d3rfob2, d3rfob3, d3rfoc2, d3rfoc3, d3rfod2, d3rfod3
        automated match to d4iqfa1
        complexed with gol, pge, so4
    2. Domains for 4iqf:
      1. 2129268Domain d4iqfa1: 4iqf A:1-204 [223312]
        Other proteins in same PDB: d4iqfa2, d4iqfa3, d4iqfb2, d4iqfb3, d4iqfc2, d4iqfc3, d4iqfd2, d4iqfd3
        automated match to d1fmta2
        complexed with gol, pg5, so4
      2. 2129269Domain d4iqfb1: 4iqf B:1-204 [223314]
        Other proteins in same PDB: d4iqfa2, d4iqfa3, d4iqfb2, d4iqfb3, d4iqfc2, d4iqfc3, d4iqfd2, d4iqfd3
        automated match to d1fmta2
        complexed with gol, pg5, so4
      3. 2129270Domain d4iqfc1: 4iqf C:1-204 [223316]
        Other proteins in same PDB: d4iqfa2, d4iqfa3, d4iqfb2, d4iqfb3, d4iqfc2, d4iqfc3, d4iqfd2, d4iqfd3
        automated match to d1fmta2
        complexed with gol, pg5, so4
      4. 2129271Domain d4iqfd1: 4iqf D:1-204 [223318]
        Other proteins in same PDB: d4iqfa2, d4iqfa3, d4iqfb2, d4iqfb3, d4iqfc2, d4iqfc3, d4iqfd2, d4iqfd3
        automated match to d1fmta2
        complexed with gol, pg5, so4
  3. 2129276Bacillus halodurans [TaxId:272558] [233206] (1 PDB entry)
  4. 2129279Brucella melitensis [TaxId:224914] [226345] (1 PDB entry)
  5. 2129281Campylobacter jejuni [TaxId:192222] [275366] (1 PDB entry)
  6. 2129284Coxiella burnetii [TaxId:777] [189726] (2 PDB entries)
    1. Domain for 3tqq:
    2. Domain for 3tqr:
  7. 2129287Geobacillus kaustophilus [TaxId:235909] [231809] (1 PDB entry)
  8. 2129289Streptococcus pneumoniae [TaxId:170187] [268856] (1 PDB entry)
  9. 2129291Symbiobacterium toebii [TaxId:120580] [311272] (1 PDB entry)
  10. 2129293Vibrio cholerae [TaxId:666] [226045] (1 PDB entry)
  11. 2285426Pseudomonas aeruginosa [TaxId:208964] [328727] (1 PDB entry)

More info for Protein automated matches from c.65.1.0: automated matches

Timeline for Protein automated matches from c.65.1.0: automated matches: