Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2518698Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
    consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
    Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
    Domain 2 has parallel beta-sheet of 4 strands, order 1234
  4. 2518699Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families) (S)
  5. 2519071Family c.88.1.0: automated matches [191606] (1 protein)
    not a true family
  6. 2519072Protein automated matches [191105] (6 species)
    not a true protein

Species:

  1. 2519073Bacillus paralicheniformis [TaxId:1648923] [404522] (5 PDB entries)
    1. Domains for 7c91:
      1. 2519078Domain d7c91a_: 7c91 A: [404616]
        automated match to d5k4ga_
        complexed with dsg, fmt, mg
      2. 2519079Domain d7c91b_: 7c91 B: [404545]
        automated match to d5k4ga_
        complexed with dsg, fmt, mg
    2. Domains for 7cb4:
      1. 2519080Domain d7cb4a_: 7cb4 A: [404605]
        automated match to d5k4ga_
        complexed with fmt, gol, mg
      2. 2519081Domain d7cb4b_: 7cb4 B: [404593]
        automated match to d5k4ga_
        complexed with fmt, gol, mg
    3. Domains for 7cbr:
      1. 2519074Domain d7cbra_: 7cbr A: [404523]
        automated match to d5k4ga_
        complexed with dsg, fmt, mg
      2. 2519075Domain d7cbrb_: 7cbr B: [404555]
        automated match to d5k4ga_
        complexed with dsg, fmt, mg
    4. Domains for 7cbu:
      1. 2519082Domain d7cbua_: 7cbu A: [404671]
        automated match to d5k4ga_
        complexed with asp, fmt, mg
      2. 2519083Domain d7cbub_: 7cbu B: [404678]
        automated match to d5k4ga_
        complexed with asp, fmt, mg
    5. Domains for 7cbw:
      1. 2519076Domain d7cbwa_: 7cbw A: [404633]
        automated match to d5k4ga_
        complexed with fmt, mg
      2. 2519077Domain d7cbwb_: 7cbw B: [404632]
        automated match to d5k4ga_
        complexed with fmt, mg
  2. 2519084Bacillus sp. [TaxId:2200762] [404520] (2 PDB entries)
    1. Domains for 7c8q:
      1. 2519085Domain d7c8qa_: 7c8q A: [404597]
        automated match to d5k4ga_
        complexed with dsg, fmt, mg
      2. 2519086Domain d7c8qb_: 7c8q B: [404594]
        automated match to d5k4ga_
        complexed with dsg, fmt, mg
    2. Domains for 7c8x:
      1. 2519087Domain d7c8xa_: 7c8x A: [404521]
        automated match to d5k4ga_
        complexed with asn, fmt, mg
      2. 2519088Domain d7c8xb_: 7c8x B: [404526]
        automated match to d5k4ga_
        complexed with asn, fmt, mg
  3. 2519089Helicobacter pylori [TaxId:210] [189137] (2 PDB entries)
    1. Domain for 2wlt:
    2. Domain for 2wt4:
  4. 2519092Pyrococcus furiosus [TaxId:186497] [261664] (1 PDB entry)
  5. 2519094Pyrococcus horikoshii [TaxId:53953] [224960] (2 PDB entries)
    1. Domains for 1wls:
      1. 2519095Domain d1wlsa_: 1wls A: [203005]
        automated match to d3ntxa_
      2. 2519096Domain d1wlsb_: 1wls B: [203006]
        automated match to d3ntxa_
    2. Domains for 1wnf:
      1. 2519097Domain d1wnfa_: 1wnf A: [203007]
        automated match to d3ntxa_
        complexed with edo
      2. 2519098Domain d1wnfb_: 1wnf B: [203008]
        automated match to d3ntxa_
        complexed with edo
  6. 2519099Thermococcus kodakarensis [TaxId:69014] [341313] (1 PDB entry)

More info for Protein automated matches from c.88.1.0: automated matches

Timeline for Protein automated matches from c.88.1.0: automated matches: