SCOPe 2.02: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.02
Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
Superfamily d.58.6: Nucleoside diphosphate kinase, NDK [54919] (2 families)
Family d.58.6.0: automated matches [191597] (1 protein)
not a true family
Protein automated matches [191087] (5 species)
not a true protein

Species:

Aquifex aeolicus [TaxId:63363] [193801] (1 PDB entry)
- Domain for 3zto:
  - Domain d3ztoa_: 3zto A: [193802]
    automated match to d3pj9d_
    complexed with so4
Babesia bovis [TaxId:484906] [189049] (1 PDB entry)
- Domains for 3js9:
  1. Domain d3js9a_: 3js9 A: [178754]
    automated match to d1bhna_
    complexed with so4
  2. Domain d3js9b_: 3js9 B: [178755]
    automated match to d1bhna_
    complexed with so4
  3. Domain d3js9c_: 3js9 C: [178756]
    automated match to d1bhna_
    complexed with so4
Fungus (Encephalitozoon cuniculi) [TaxId:6035] [189331] (1 PDB entry)
- Domains for 3mpd:
  1. Domain d3mpda_: 3mpd A: [181477]
    automated match to d1ndla_
    complexed with edo
  2. Domain d3mpdb_: 3mpd B: [181478]
    automated match to d1ndla_
    complexed with edo
Trypanosoma brucei [TaxId:999953] [195043] (3 PDB entries)
1. Domains for 4f36:
  1. Domain d4f36a_: 4f36 A: [195366]
    automated match to d3prvb_
    complexed with scn
  2. Domain d4f36e_: 4f36 E: [195365]
    automated match to d3prvb_
    complexed with scn
2. Domains for 4f4a:
  1. Domain d4f4aa_: 4f4a A: [195275]
    automated match to d3prvb_
    complexed with mg, udp
  2. Domain d4f4ab_: 4f4a B: [195274]
    automated match to d3prvb_
    complexed with mg, udp
  3. Domain d4f4ac_: 4f4a C: [195273]
    automated match to d3prvb_
    complexed with mg, udp
3. Domain for 4fky:
  - Domain d4fkyc_: 4fky C: [195044]
    automated match to d3prvb_
    complexed with gdp, mg, mpd
Trypanosoma cruzi [TaxId:5693] [189957] (1 PDB entry)
- Domains for 3prv:
  1. Domain d3prva_: 3prv A: [183940]
    automated match to d1be4a_
  2. Domain d3prvb_: 3prv B: [183941]
    automated match to d1be4a_
  3. Domain d3prvc_: 3prv C: [183942]
    automated match to d1be4a_
  4. Domain d3prvd_: 3prv D: [183943]
    automated match to d1be4a_
  5. Domain d3prve_: 3prv E: [183944]
    automated match to d1be4a_
  6. Domain d3prvf_: 3prv F: [183945]
    automated match to d1be4a_

More info for Protein automated matches from d.58.6.0: automated matches

Timeline for Protein automated matches from d.58.6.0: automated matches:

Protein automated matches from d.58.6.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from d.58.6.0: automated matches appears in SCOPe 2.03
Protein automated matches from d.58.6.0: automated matches appears in the current release, SCOPe 2.08