SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.10: Aldolase [51569] (9 families)
Common fold covers whole protein structure
Family c.1.10.8: Class-II DAHP synthetase [141840] (2 proteins)
Pfam PF01474
Protein automated matches [191084] (2 species)
not a true protein

Species:

Mycobacterium tuberculosis [TaxId:1773] [189668] (2 PDB entries)
1. Domain for 2ypp:
  - Domain d2yppa_: 2ypp A: [197056]
    automated match to d3kgfb_
    complexed with cl, gol, mn, so4, tyr
2. Domains for 3pfp:
  1. Domain d3pfpa_: 3pfp A: [183697]
    automated match to d2b7oa1
    complexed with 035, 036, cl, mn, so4
  2. Domain d3pfpb_: 3pfp B: [183698]
    automated match to d2b7oa1
    complexed with 035, 036, cl, mn, so4
Mycobacterium tuberculosis [TaxId:83332] [189029] (6 PDB entries)
1. Domains for 2w19:
  1. Domain d2w19a_: 2w19 A: [169001]
    automated match to d2b7oa1
    complexed with gol, so4
  2. Domain d2w19b_: 2w19 B: [169002]
    automated match to d2b7oa1
    complexed with gol, so4
2. Domains for 2w1a:
  1. Domain d2w1aa_: 2w1a A: [169003]
    automated match to d2b7oa1
    complexed with ce1, gol, mn, pg4, so4, tsa
  2. Domain d2w1ab_: 2w1a B: [169004]
    automated match to d2b7oa1
    complexed with ce1, gol, mn, pg4, so4, tsa
3. Domains for 2ypo:
  1. Domain d2ypoa_: 2ypo A: [207711]
    automated match to d3rzib_
    complexed with gol, mn, phe, so4
  2. Domain d2ypob_: 2ypo B: [207712]
    automated match to d3rzib_
    complexed with gol, mn, phe, so4
4. Domain for 2ypp:
  - Domain d2yppb_: 2ypp B: [198773]
    automated match to d3rzib_
    complexed with cl, gol, mn, so4, tyr
5. Domains for 2ypq:
  1. Domain d2ypqa_: 2ypq A: [207713]
    automated match to d3rzib_
    complexed with cl, gol, mn, po4, so4, trp, tyr
  2. Domain d2ypqb_: 2ypq B: [207714]
    automated match to d3rzib_
    complexed with cl, gol, mn, po4, so4, trp, tyr
6. Domains for 3rzi:
  1. Domain d3rzia_: 3rzi A: [185227]
    automated match to d2b7oa1
    complexed with cl, gol, mn, phe, po4, so4, trp
  2. Domain d3rzib_: 3rzi B: [185228]
    automated match to d2b7oa1
    complexed with cl, gol, mn, phe, po4, so4, trp

More info for Protein automated matches from c.1.10.8: Class-II DAHP synthetase

Timeline for Protein automated matches from c.1.10.8: Class-II DAHP synthetase:

Protein automated matches from c.1.10.8: Class-II DAHP synthetase first appeared in SCOPe 2.01
Protein automated matches from c.1.10.8: Class-II DAHP synthetase appears in SCOPe 2.04
Protein automated matches from c.1.10.8: Class-II DAHP synthetase appears in SCOPe 2.06
Protein automated matches from c.1.10.8: Class-II DAHP synthetase appears in the current release, SCOPe 2.08