Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2085156Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2086424Family c.1.10.8: Class-II DAHP synthetase [141840] (2 protein domains)
    Pfam PF01474
  6. 2086439Protein automated matches [191084] (3 species)
    not a true protein

Species:

  1. 2086440Mycobacterium tuberculosis [TaxId:1773] [189668] (3 PDB entries)
    1. Domain for 2ypp:
    2. Domains for 3pfp:
      1. 2086442Domain d3pfpa1: 3pfp A:1-462 [183697]
        Other proteins in same PDB: d3pfpa2, d3pfpb2
        automated match to d2b7oa1
        complexed with 035, 036, cl, mn, so4
      2. 2086443Domain d3pfpb1: 3pfp B:1-462 [183698]
        Other proteins in same PDB: d3pfpa2, d3pfpb2
        automated match to d2b7oa1
        complexed with 035, 036, cl, mn, so4
    3. Domains for 5ckv:
      1. 2269472Domain d5ckva_: 5ckv A: [312778]
        automated match to d3kgfb_
        complexed with cl, gol, mn, phe, so4, trp, tyr
      2. 2269490Domain d5ckvb_: 5ckv B: [312796]
        automated match to d3kgfb_
        complexed with cl, gol, mn, phe, so4, trp, tyr
  2. 2086444Mycobacterium tuberculosis [TaxId:83332] [189029] (7 PDB entries)
    1. Domains for 2w19:
      1. 2086450Domain d2w19a_: 2w19 A: [169001]
        automated match to d2b7oa1
        complexed with gol, so4
      2. 2086451Domain d2w19b_: 2w19 B: [169002]
        automated match to d2b7oa1
        complexed with gol, so4
    2. Domains for 2w1a:
      1. 2086452Domain d2w1aa_: 2w1a A: [169003]
        automated match to d2b7oa1
        complexed with ce1, gol, mn, pg4, so4, tsa
      2. 2086453Domain d2w1ab_: 2w1a B: [169004]
        automated match to d2b7oa1
        complexed with ce1, gol, mn, pg4, so4, tsa
    3. Domains for 2ypo:
      1. 2086445Domain d2ypoa_: 2ypo A: [207711]
        automated match to d3rzib_
        complexed with gol, mn, phe, so4
      2. 2086446Domain d2ypob_: 2ypo B: [207712]
        automated match to d3rzib_
        complexed with gol, mn, phe, so4
    4. Domain for 2ypp:
    5. Domains for 2ypq:
      1. 2086454Domain d2ypqa_: 2ypq A: [207713]
        automated match to d3rzib_
        complexed with cl, gol, mn, po4, so4, trp, tyr
      2. 2086455Domain d2ypqb_: 2ypq B: [207714]
        automated match to d3rzib_
        complexed with cl, gol, mn, po4, so4, trp, tyr
    6. Domains for 3rzi:
      1. 2086447Domain d3rzia_: 3rzi A: [185227]
        automated match to d2b7oa1
        complexed with cl, gol, mn, phe, po4, so4, trp
      2. 2086448Domain d3rzib_: 3rzi B: [185228]
        automated match to d2b7oa1
        complexed with cl, gol, mn, phe, po4, so4, trp
    7. Domains for 5ckx:
      1. 2269502Domain d5ckxb_: 5ckx B: [312808]
        automated match to d3kgfb_
        complexed with cl, gol, mn, phe, so4, tsa, tyr
      2. 2269528Domain d5ckxa_: 5ckx A: [312833]
        automated match to d3kgfb_
        complexed with cl, gol, mn, phe, so4, tsa, tyr
  3. 2293859Corynebacterium glutamicum [TaxId:1718] [337160] (3 PDB entries)
    1. Domain for 5huc:
    2. Domains for 5hud:
      1. 2293863Domain d5hudc1: 5hud C:11-472 [337164]
        Other proteins in same PDB: d5hudc2, d5hudd2
        automated match to d3kgfb_
        complexed with gol, mn, peg, pg4, pge, po4, trp, tsa
      2. 2293887Domain d5huda_: 5hud A: [337188]
        Other proteins in same PDB: d5hudc2, d5hudd2
        automated match to d3kgfb_
        complexed with gol, mn, peg, pg4, pge, po4, trp, tsa
      3. 2293891Domain d5hudd1: 5hud D:11-472 [337192]
        Other proteins in same PDB: d5hudc2, d5hudd2
        automated match to d3kgfb_
        complexed with gol, mn, peg, pg4, pge, po4, trp, tsa
      4. 2293991Domain d5hudb_: 5hud B: [337292]
        Other proteins in same PDB: d5hudc2, d5hudd2
        automated match to d3kgfb_
        complexed with gol, mn, peg, pg4, pge, po4, trp, tsa
    3. Domain for 5hue:

More info for Protein automated matches from c.1.10.8: Class-II DAHP synthetase

Timeline for Protein automated matches from c.1.10.8: Class-II DAHP synthetase: