Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1949014Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)
  3. 1953994Fold e.23: Acetyl-CoA synthetase-like [56800] (1 superfamily)
    4 domains: (1&2) duplication: share the same alpha/beta fold; (3) beta-barrel; (4) alpha+beta
  4. 1953995Superfamily e.23.1: Acetyl-CoA synthetase-like [56801] (2 families) (S)
  5. 1954067Family e.23.1.0: automated matches [191594] (1 protein)
    not a true family
  6. 1954068Protein automated matches [191083] (15 species)
    not a true protein

Species:

  1. 1954069Acinetobacter baumannii [TaxId:557601] [189484] (5 PDB entries)
    1. Domains for 3o82:
      1. 1954078Domain d3o82a_: 3o82 A: [182863]
        automated match to d1md9a_
        complexed with ca, hp8
      2. 1954079Domain d3o82b_: 3o82 B: [182864]
        automated match to d1md9a_
        complexed with ca, hp8
    2. Domains for 3o83:
      1. 1954070Domain d3o83a_: 3o83 A: [182865]
        automated match to d1md9a_
        complexed with ca, ixn, mpd, mrd
      2. 1954071Domain d3o83b_: 3o83 B: [182866]
        automated match to d1md9a_
        complexed with ca, ixn, mpd, mrd
    3. Domains for 3o84:
      1. 1954074Domain d3o84a_: 3o84 A: [182867]
        automated match to d1md9a_
        complexed with ca, htj, mpd, mrd, pge
      2. 1954075Domain d3o84b_: 3o84 B: [182868]
        automated match to d1md9a_
        complexed with ca, htj, mpd, mrd, pge
    4. Domains for 3u16:
      1. 1954072Domain d3u16a_: 3u16 A: [217139]
        automated match to d3o83a_
        complexed with ca, h89, mpd, mrd
      2. 1954073Domain d3u16b_: 3u16 B: [217140]
        automated match to d3o83b_
        complexed with ca, h89, mpd, mrd
    5. Domains for 3u17:
      1. 1954076Domain d3u17a_: 3u17 A: [217141]
        automated match to d3o83a_
        complexed with ca, h90, mpd, mrd
      2. 1954077Domain d3u17b_: 3u17 B: [217142]
        automated match to d3o83b_
        complexed with ca, h90, mpd, mrd
  2. 1954080Bacillus cereus [TaxId:226900] [267827] (4 PDB entries)
    1. Domain for 3dhv:
    2. Domain for 3fcc:
    3. Domain for 3fce:
    4. Domain for 4pzp:
  3. 1954085Bacillus subtilis [TaxId:224308] [276264] (3 PDB entries)
    1. Domain for 5buq:
    2. Domain for 5bur:
    3. Domain for 5bus:
  4. 1954089Burkholderia xenovorans [TaxId:266265] [225346] (1 PDB entry)
  5. 1954092Human (Homo sapiens) [TaxId:9606] [255628] (7 PDB entries)
    1. Domains for 2vze:
      1. 1954100Domain d2vzea_: 2vze A: [243959]
        automated match to d4eatb_
        complexed with amp, mg; mutant
      2. 1954101Domain d2vzeb_: 2vze B: [243960]
        automated match to d4eatb_
        complexed with amp, mg; mutant
      3. 1954102Domain d2vzec_: 2vze C: [243961]
        automated match to d4eatb_
        complexed with amp, mg; mutant
    2. Domains for 2wd9:
      1. 1954103Domain d2wd9a_: 2wd9 A: [244116]
        automated match to d4eata_
        complexed with ibp, mg; mutant
      2. 1954104Domain d2wd9b_: 2wd9 B: [244117]
        automated match to d4eata_
        complexed with ibp, mg; mutant
      3. 1954105Domain d2wd9c_: 2wd9 C: [244118]
        automated match to d4eata_
        complexed with ibp, mg; mutant
    3. Domain for 3b7w:
    4. Domain for 3c5e:
    5. Domain for 3day:
    6. Domains for 3eq6:
      1. 1954098Domain d3eq6a_: 3eq6 A: [245897]
        automated match to d4eatb_
        complexed with amp, bco; mutant
      2. 1954099Domain d3eq6b_: 3eq6 B: [245898]
        automated match to d4eatb_
        complexed with amp, bco; mutant
    7. Domains for 3gpc:
      1. 1954094Domain d3gpca_: 3gpc A: [246333]
        automated match to d4eatb_
        complexed with coa, mg; mutant
      2. 1954095Domain d3gpcb_: 3gpc B: [246334]
        automated match to d4eatb_
        complexed with coa, mg; mutant
  6. 1954106Mycobacterium tuberculosis [TaxId:1773] [226299] (1 PDB entry)
  7. 1954108Planktothrix agardhii [TaxId:1160] [274455] (3 PDB entries)
    1. Domain for 4d4i:
    2. Domain for 4d56:
    3. Domain for 4d57:
  8. 1954112Populus tomentosa [TaxId:118781] [225956] (3 PDB entries)
    1. Domain for 3a9u:
    2. Domain for 3a9v:
    3. Domain for 3ni2:
  9. 1954116Rhodopseudomonas palustris [TaxId:1076] [189027] (8 PDB entries)
    1. Domains for 3ivr:
      1. 1954119Domain d3ivra_: 3ivr A: [178635]
        automated match to d1t5dx_
        complexed with cl, gol
      2. 1954120Domain d3ivrb_: 3ivr B: [178636]
        automated match to d1t5dx_
        complexed with cl, gol
    2. Domains for 4eat:
      1. 1954117Domain d4eata_: 4eat A: [234367]
        automated match to d2v7ba_
        complexed with bez, edo, gol
      2. 1954118Domain d4eatb_: 4eat B: [234368]
        automated match to d2v7ba_
        complexed with bez, edo, gol
    3. Domains for 4rlf:
      1. 1954127Domain d4rlfa_: 4rlf A: [277550]
        automated match to d4eatb_
        complexed with 3sk, 4ma, gol
      2. 1954128Domain d4rlfb_: 4rlf B: [277553]
        automated match to d4eatb_
        complexed with 3sk, 4ma, gol
    4. Domains for 4rlq:
      1. 1954121Domain d4rlqa_: 4rlq A: [277554]
        automated match to d4eatb_
        complexed with 3sk, gol
      2. 1954122Domain d4rlqb_: 4rlq B: [277555]
        automated match to d4eatb_
        complexed with 3sk, gol
    5. Domains for 4rm2:
      1. 1954131Domain d4rm2a_: 4rm2 A: [277556]
        automated match to d4eatb_
        complexed with 3u4
      2. 1954132Domain d4rm2b_: 4rm2 B: [277561]
        automated match to d4eatb_
        complexed with 3u4
    6. Domains for 4rm3:
      1. 1954129Domain d4rm3a_: 4rm3 A: [277564]
        automated match to d4eatb_
        complexed with foa
      2. 1954130Domain d4rm3b_: 4rm3 B: [277565]
        automated match to d4eatb_
        complexed with foa
    7. Domains for 4rmn:
      1. 1954125Domain d4rmna_: 4rmn A: [277562]
        automated match to d4eatb_
        complexed with c21, gol
      2. 1954126Domain d4rmnb_: 4rmn B: [277563]
        automated match to d4eatb_
        complexed with c21, gol
    8. Domains for 4zjz:
      1. 1954123Domain d4zjza_: 4zjz A: [277730]
        automated match to d4eatb_
        complexed with bez, gol, oob
      2. 1954124Domain d4zjzb_: 4zjz B: [277734]
        automated match to d4eatb_
        complexed with bez, gol, oob
  10. 1954133Rhodopseudomonas palustris [TaxId:258594] [226421] (4 PDB entries)
    1. Domains for 4fuq:
      1. 1954134Domain d4fuqa_: 4fuq A: [221539]
        automated match to d2qvzx_
        complexed with gol, so4
      2. 1954135Domain d4fuqb_: 4fuq B: [221540]
        automated match to d2qvzx_
        complexed with gol, so4
      3. 1954136Domain d4fuqc_: 4fuq C: [221541]
        automated match to d2qvzx_
        complexed with gol, so4
      4. 1954137Domain d4fuqd_: 4fuq D: [221542]
        automated match to d2qvzx_
        complexed with gol, so4
    2. Domain for 4fut:
    3. Domains for 4gxq:
      1. 1954140Domain d4gxqa_: 4gxq A: [222263]
        automated match to d2qvzx_
        complexed with atp, co3, mg
      2. 1954141Domain d4gxqb_: 4gxq B: [222264]
        automated match to d2qvzx_
        complexed with atp, co3, mg
      3. 1954142Domain d4gxqc_: 4gxq C: [222265]
        automated match to d2qvzx_
        complexed with atp, co3, mg
    4. Domain for 4gxr:
  11. 1954143Stigmatella aurantiaca [TaxId:41] [279348] (1 PDB entry)
  12. 1954146Streptococcus pyogenes [TaxId:160490] [267852] (1 PDB entry)
  13. 1954151Streptococcus pyogenes [TaxId:301450] [267851] (1 PDB entry)
  14. 1954154Streptomyces platensis [TaxId:684832] [278375] (1 PDB entry)
  15. 1954157Streptomyces sp. [TaxId:1931] [256140] (3 PDB entries)
    1. Domain for 3vnq:
    2. Domain for 3vnr:
    3. Domain for 3vns:

More info for Protein automated matches from e.23.1.0: automated matches

Timeline for Protein automated matches from e.23.1.0: automated matches: