Class b: All beta proteins [48724] (176 folds) |
Fold b.34: SH3-like barrel [50036] (21 superfamilies) barrel, partly opened; n*=4, S*=8; meander the last strand is interrupted by a turn of 3-10 helix |
Superfamily b.34.13: Chromo domain-like [54160] (4 families) SH3-like barrel is capped by a C-terminal helix |
Family b.34.13.2: Chromo domain [54165] (8 proteins) lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold |
Protein automated matches [191035] (3 species) not a true protein |
Arabidopsis thaliana [TaxId:3702] [279724] (2 PDB entries) |
Domain d2n88a_: 2n88 A: [279835] automated match to d1x3pa1 |
Domain d5e4xa_: 5e4x A: [279725] automated match to d1x3pa1 complexed with mg |
Human (Homo sapiens) [TaxId:9606] [188859] (13 PDB entries) |
Domain d2d9ua_: 2d9u A: [241527] automated match to d2dnta1 |
Domain d2k28a_: 2k28 A: [242355] automated match to d2dnta1 |
Domain d2mj8a_: 2mj8 A: [256432] automated match to d2dnta1 |
Domain d3gv6a_: 3gv6 A: [177024] automated match to d2dnva1 protein/DNA complex |
Domain d3h91a_: 3h91 A: [177326] automated match to d2dnva1 protein/DNA complex |
Domain d3h91b_: 3h91 B: [177327] automated match to d2dnva1 protein/DNA complex |
Domain d3i3ca_: 3i3c A: [178043] automated match to d1s4za_ complexed with na |
Domain d3i3cb_: 3i3c B: [178044] automated match to d1s4za_ complexed with na |
Domain d3i3cc_: 3i3c C: [178045] automated match to d1s4za_ complexed with na |
Domain d3i3cd_: 3i3c D: [178046] automated match to d1s4za_ complexed with na |
Domain d3i8za_: 3i8z A: [178150] automated match to d2dnva1 |
Domain d3i90a_: 3i90 A: [178151] automated match to d2dnva1 |
Domain d3i90b_: 3i90 B: [178152] automated match to d2dnva1 |
Domain d3i91a_: 3i91 A: [178153] automated match to d2dnva1 |
Domain d3i91b_: 3i91 B: [178154] automated match to d2dnva1 |
Domain d3kupa_: 3kup A: [179720] automated match to d1dz1a_ complexed with unx |
Domain d3kupb_: 3kup B: [179721] automated match to d1dz1a_ complexed with unx |
Domain d3kupc_: 3kup C: [179722] automated match to d1dz1a_ complexed with unx |
Domain d3kupd_: 3kup D: [179723] automated match to d1dz1a_ complexed with unx |
Domain d3tzda_: 3tzd A: [217114] automated match to d4haea_ protein/DNA complex |
Domain d4haea_: 4hae A: [194545] automated match to d2dnta1 complexed with so4, unx |
Domain d5afwa1: 5afw A:270-362 [280235] automated match to d2b2yb2 complexed with cl, edo |
Domain d5afwa2: 5afw A:374-443 [280238] automated match to d2b2ta2 complexed with cl, edo |
Mouse (Mus musculus) [TaxId:10090] [255382] (3 PDB entries) |
Domain d2kvma_: 2kvm A: [242678] automated match to d3gv6a_ |
Domain d4x3ta_: 4x3t A: [270093] automated match to d2kvma_ complexed with 45e, edo, zn |
Domain d4x3tb_: 4x3t B: [270095] automated match to d2kvma_ complexed with 45e, edo, zn |
Domain d4x3tc_: 4x3t C: [270101] automated match to d2kvma_ complexed with 45e, edo, zn |
Domain d4x3td_: 4x3t D: [270097] automated match to d2kvma_ complexed with 45e, edo, zn |
Domain d4x3te_: 4x3t E: [270100] automated match to d2kvma_ complexed with 45e, edo, zn |
Domain d4x3tf_: 4x3t F: [270102] automated match to d2kvma_ complexed with 45e, edo, zn |
Domain d4x3ua_: 4x3u A: [270096] automated match to d2kvma_ complexed with svr |
Domain d4x3ub_: 4x3u B: [270094] automated match to d2kvma_ complexed with svr |
Timeline for Protein automated matches from b.34.13.2: Chromo domain: