Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 916790Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 917011Superfamily a.60.3: C-terminal domain of RNA polymerase alpha subunit [47789] (1 family) (S)
    contains one classic and one pseudo HhH motifs
  5. 917012Family a.60.3.1: C-terminal domain of RNA polymerase alpha subunit [47790] (2 proteins)
  6. 917022Protein automated matches [191020] (2 species)
    not a true protein

Species:

  1. 917023Bacillus subtilis [TaxId:1423] [188809] (2 PDB entries)
    1. Domain for 3gfk:
    2. Domain for 3ihq:
      • 917024Domain d3ihqb_: 3ihq B: [178327]
        Other proteins in same PDB: d3ihqa_
        automated match to d1z3eb1
        protein/DNA complex; protein/RNA complex; complexed with imd
  2. 917026Escherichia coli K-12 [TaxId:83333] [189388] (2 PDB entries)
    1. Domains for 3k4g:
      1. 917027Domain d3k4ga_: 3k4g A: [179067]
        automated match to d1cooa_
        complexed with na
      2. 917028Domain d3k4gb_: 3k4g B: [179068]
        automated match to d1cooa_
        complexed with na
      3. 917029Domain d3k4gc_: 3k4g C: [179069]
        automated match to d1cooa_
        complexed with na
      4. 917030Domain d3k4gd_: 3k4g D: [179070]
        automated match to d1cooa_
        complexed with na
      5. 917031Domain d3k4ge_: 3k4g E: [179071]
        automated match to d1cooa_
        complexed with na
      6. 917032Domain d3k4gf_: 3k4g F: [179072]
        automated match to d1cooa_
        complexed with na
      7. 917033Domain d3k4gg_: 3k4g G: [179073]
        automated match to d1cooa_
        complexed with na
      8. 917034Domain d3k4gh_: 3k4g H: [179074]
        automated match to d1cooa_
        complexed with na
    2. Domains for 3n4m:
      1. 917035Domain d3n4mb_: 3n4m B: [181899]
        automated match to d1cooa_
        protein/DNA complex; protein/RNA complex; complexed with cmp, peg
      2. 917036Domain d3n4mc_: 3n4m C: [181900]
        automated match to d1cooa_
        protein/DNA complex; protein/RNA complex; complexed with cmp, peg

More info for Protein automated matches from a.60.3.1: C-terminal domain of RNA polymerase alpha subunit

Timeline for Protein automated matches from a.60.3.1: C-terminal domain of RNA polymerase alpha subunit:

  • Protein automated matches from a.60.3.1: C-terminal domain of RNA polymerase alpha subunit is new in SCOPe 2.01-stable
  • Protein automated matches from a.60.3.1: C-terminal domain of RNA polymerase alpha subunit appears in SCOPe 2.02
  • Protein automated matches from a.60.3.1: C-terminal domain of RNA polymerase alpha subunit appears in the current release, SCOPe 2.08