SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2226297Fold f.23: Single transmembrane helix [81407] (42 superfamilies)
    not a true fold
  4. 2227352Superfamily f.23.32: Photosystem II reaction center protein J, PsbJ [161021] (1 family) (S)
    automatically mapped to Pfam PF01788
  5. 2227353Family f.23.32.1: PsbJ-like [161022] (2 protein domains)
    Pfam PF01788
  6. 2227362Protein automated matches [191002] (3 species)
    not a true protein


  1. 2227363Thermosynechococcus elongatus [TaxId:32046] [188747] (2 PDB entries)
    1. Domain for 3bz1:
    2. Domain for 3bz2:
  2. 2227366Thermosynechococcus vulcanus [TaxId:32053] [189916] (8 PDB entries)
    1. Domain for 4il6:
    2. Domain for 4ub6:
    3. Domain for 4ub8:
    4. Domain for 5b5e:
    5. Domain for 5b66:
    6. Domain for 5mx2:
    7. Domain for 5ws5:
    8. Domain for 5ws6:
  3. 2283986Thermosynechococcus elongatus [TaxId:197221] [327287] (3 PDB entries)
    1. Domain for 5kaf:
    2. Domain for 5kai:
    3. Domain for 5tis:

More info for Protein automated matches from f.23.32.1: PsbJ-like

Timeline for Protein automated matches from f.23.32.1: PsbJ-like: