SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2101600Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. 2104318Superfamily c.23.16: Class I glutamine amidotransferase-like [52317] (10 families) (S)
    conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures
  5. 2104490Family c.23.16.2: DJ-1/PfpI [52325] (10 protein domains)
    contains a catalytic triad or dyad different from the class I GAT triad
  6. 2104608Protein automated matches [190995] (7 species)
    not a true protein

Species:

  1. 2104609Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [258813] (1 PDB entry)
  2. 2104611Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [189556] (1 PDB entry)
  3. 2104614Candida albicans [TaxId:237561] [226745] (1 PDB entry)
  4. 2104616Human (Homo sapiens) [TaxId:9606] [188709] (1 PDB entry)
  5. 2104618Thermococcus onnurineus [TaxId:523850] [189567] (1 PDB entry)
  6. 2279411Salmonella enterica [TaxId:90371] [322712] (1 PDB entry)
  7. 2284387Escherichia coli [TaxId:562] [327688] (1 PDB entry)

More info for Protein automated matches from c.23.16.2: DJ-1/PfpI

Timeline for Protein automated matches from c.23.16.2: DJ-1/PfpI: