Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1755446Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1767525Superfamily b.1.2: Fibronectin type III [49265] (2 families) (S)
  5. 1768056Family b.1.2.0: automated matches [191562] (1 protein)
    not a true family
  6. 1768057Protein automated matches [190976] (4 species)
    not a true protein

Species:

  1. 1768058Artificial gene [TaxId:32630] [233328] (6 PDB entries)
    1. Domains for 3qht:
      1. 1768064Domain d3qhtc_: 3qht C: [233329]
        Other proteins in same PDB: d3qhta_, d3qhtb_
        automated match to d2ck2a_
        complexed with gol
      2. 1768065Domain d3qhtd_: 3qht D: [233330]
        Other proteins in same PDB: d3qhta_, d3qhtb_
        automated match to d2ck2a_
        complexed with gol
    2. Domains for 4lpt:
      1. 1768066Domain d4lpta_: 4lpt A: [236444]
        automated match to d2cuma1
      2. 1768067Domain d4lptb_: 4lpt B: [240495]
        automated match to d4lpta_
      3. 1768068Domain d4lptc_: 4lpt C: [240496]
        automated match to d4lpta_
      4. 1768069Domain d4lptd_: 4lpt D: [240497]
        automated match to d4lpta_
      5. 1768070Domain d4lpte_: 4lpt E: [240498]
        automated match to d4lpta_
      6. 1768071Domain d4lptf_: 4lpt F: [240499]
        automated match to d4lpta_
    3. Domains for 4lpv:
      1. 1768059Domain d4lpva_: 4lpv A: [236445]
        automated match to d2cuma1
        complexed with trs
      2. 1768060Domain d4lpvb_: 4lpv B: [240500]
        automated match to d4lpva_
        complexed with trs
    4. Domains for 4lpw:
      1. 1768072Domain d4lpwa_: 4lpw A: [236449]
        automated match to d1tena_
      2. 1768073Domain d4lpwb_: 4lpw B: [240501]
        automated match to d4lpwa_
    5. Domain for 4lpx:
    6. Domains for 4lpy:
      1. 1768061Domain d4lpya_: 4lpy A: [236446]
        automated match to d1tena_
        complexed with na
      2. 1768062Domain d4lpyb_: 4lpy B: [236447]
        automated match to d1tena_
        complexed with na
  2. 1768074Chicken (Gallus gallus) [TaxId:9031] [267928] (2 PDB entries)
    1. Domains for 4eq2:
      1. 1768077Domain d4eq2a1: 4eq2 A:2-100 [266233]
        automated match to d1fg9d1
      2. 1768078Domain d4eq2a2: 4eq2 A:101-207 [266234]
        automated match to d1fg9d2
    2. Domains for 4eq3:
      1. 1768075Domain d4eq3a1: 4eq3 A:2-100 [266235]
        automated match to d1fg9d1
      2. 1768076Domain d4eq3a2: 4eq3 A:101-207 [266236]
        automated match to d1fg9d2
  3. 1768079Escherichia coli [TaxId:562] [277099] (1 PDB entry)
  4. 1768081Human (Homo sapiens) [TaxId:9606] [188649] (36 PDB entries)
    1. Domain for 2arw:
    2. Domains for 2ck2:
      1. 1768096Domain d2ck2a_: 2ck2 A: [203800]
        automated match to d2cuma1
        complexed with ace; mutant
      2. 1768097Domain d2ck2b_: 2ck2 B: [203801]
        automated match to d2cuma1
        complexed with ace; mutant
    3. Domain for 2db8:
    4. Domain for 2dbj:
    5. Domain for 2dm4:
    6. Domain for 2dmk:
    7. Domain for 2doc:
    8. Domain for 2e7h:
    9. Domain for 2ed7:
    10. Domain for 2ed9:
    11. Domain for 2edd:
    12. Domain for 2edx:
    13. Domain for 2edy:
    14. Domain for 2ee2:
    15. Domain for 2ee3:
    16. Domain for 2kbg:
    17. Domain for 2ocf:
    18. Domains for 3b83:
      1. 1768103Domain d3b83a_: 3b83 A: [172478]
        automated match to d1tena_
      2. 1768104Domain d3b83b_: 3b83 B: [172479]
        automated match to d1tena_
      3. 1768105Domain d3b83c_: 3b83 C: [172480]
        automated match to d1tena_
      4. 1768106Domain d3b83d_: 3b83 D: [172481]
        automated match to d1tena_
      5. 1768107Domain d3b83e_: 3b83 E: [172482]
        automated match to d1tena_
      6. 1768108Domain d3b83f_: 3b83 F: [172483]
        automated match to d1tena_
      7. 1768109Domain d3b83g_: 3b83 G: [172484]
        automated match to d1tena_
      8. 1768110Domain d3b83h_: 3b83 H: [172485]
        automated match to d1tena_
    19. Domains for 3k2m:
      1. 1768087Domain d3k2mc_: 3k2m C: [232662]
        Other proteins in same PDB: d3k2ma_, d3k2mb_
        automated match to d2ck2a_
        complexed with po4
      2. 1768088Domain d3k2md_: 3k2m D: [232663]
        Other proteins in same PDB: d3k2ma_, d3k2mb_
        automated match to d2ck2a_
        complexed with po4
    20. Domains for 3lpw:
      1. 1768083Domain d3lpwa1: 3lpw A:1-102 [247492]
        automated match to d1bpva_
        complexed with mpd, mrd
      2. 1768084Domain d3lpwa2: 3lpw A:103-197 [247493]
        automated match to d1bpva_
        complexed with mpd, mrd
      3. 1768085Domain d3lpwb1: 3lpw B:3-102 [247494]
        automated match to d1bpva_
        complexed with mpd, mrd
      4. 1768086Domain d3lpwb2: 3lpw B:103-197 [247495]
        automated match to d1bpva_
        complexed with mpd, mrd
    21. Domain for 3qwq:
    22. Domains for 3r8q:
      1. 1768100Domain d3r8qa1: 3r8q A:1-92 [249064]
        automated match to d1fnfa2
      2. 1768101Domain d3r8qa2: 3r8q A:93-182 [249065]
        automated match to d1fnfa1
      3. 1768102Domain d3r8qa3: 3r8q A:183-271 [249066]
        automated match to d1fnfa3
    23. Domains for 3rzw:
      1. 1768098Domain d3rzwa_: 3rzw A: [233510]
        Other proteins in same PDB: d3rzwc_, d3rzwd_
        automated match to d2ck2a_
        complexed with gol
      2. 1768099Domain d3rzwb_: 3rzw B: [239707]
        Other proteins in same PDB: d3rzwc_, d3rzwd_
        automated match to d3rzwa_
        complexed with gol
    24. Domain for 3t04:
    25. Domain for 3uyo:
    26. Domains for 3wih:
      1. 1768090Domain d3wiha_: 3wih A: [268021]
        Other proteins in same PDB: d3wihl1, d3wihl2, d3wihm1, d3wihm2
        automated match to d4n5ua_
        complexed with gol
      2. 1768091Domain d3wihb_: 3wih B: [268022]
        Other proteins in same PDB: d3wihl1, d3wihl2, d3wihm1, d3wihm2
        automated match to d4n5ua_
        complexed with gol
    27. Domain for 4mmz:
    28. Domain for 4n5u:
    29. Domain for 4n68:
    30. Domains for 4o00:
      1. 1768093Domain d4o00a_: 4o00 A: [268421]
        automated match to d1bpva_
      2. 1768094Domain d4o00b_: 4o00 B: [268419]
        automated match to d1bpva_
    31. Domains for 4ov6:
      1. 1768117Domain d4ov6f_: 4ov6 F: [258048]
        Other proteins in same PDB: d4ov6b_, d4ov6e_
        automated match to d2ck2a_
        complexed with edo, pg4
      2. 1768118Domain d4ov6g_: 4ov6 G: [263354]
        Other proteins in same PDB: d4ov6b_, d4ov6e_
        automated match to d4ov6f_
        complexed with edo, pg4
    32. Domains for 4s0s:
      1. 1768119Domain d4s0sd_: 4s0s D: [269365]
        Other proteins in same PDB: d4s0sa_, d4s0sb_
        automated match to d4ov6f_
      2. 1768120Domain d4s0se_: 4s0s E: [269366]
        Other proteins in same PDB: d4s0sa_, d4s0sb_
        automated match to d4ov6f_
    33. Domains for 4s0t:
      1. 1768124Domain d4s0td_: 4s0t D: [269368]
        Other proteins in same PDB: d4s0ta_, d4s0tb_
        automated match to d4ov6f_
        complexed with 40u
      2. 1768125Domain d4s0te_: 4s0t E: [269369]
        Other proteins in same PDB: d4s0ta_, d4s0tb_
        automated match to d4ov6f_
        complexed with 40u
    34. Domains for 5a41:
      1. 1768111Domain d5a41e_: 5a41 E: [276466]
        automated match to d3uyod_
        complexed with f, na
      2. 1768112Domain d5a41f_: 5a41 F: [276469]
        automated match to d3uyod_
        complexed with f, na
      3. 1768113Domain d5a41g_: 5a41 G: [276470]
        automated match to d3uyod_
        complexed with f, na
      4. 1768114Domain d5a41h_: 5a41 H: [276468]
        automated match to d3uyod_
        complexed with f, na
    35. Domains for 5a43:
      1. 1768121Domain d5a43c_: 5a43 C: [276465]
        automated match to d3k2mc_
        complexed with dmu, f, na
      2. 1768122Domain d5a43d_: 5a43 D: [276467]
        automated match to d3k2mc_
        complexed with dmu, f, na
    36. Domains for 5ecj:
      1. 1768126Domain d5ecje_: 5ecj E: [279738]
        automated match to d3uyod_
      2. 1768127Domain d5ecjf_: 5ecj F: [279739]
        automated match to d3uyod_

More info for Protein automated matches from b.1.2.0: automated matches

Timeline for Protein automated matches from b.1.2.0: automated matches: