Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2534201Fold d.109: Gelsolin-like [55752] (3 superfamilies)
    3 layers: a/b/a; contains mixed beta-sheet
  4. 2534202Superfamily d.109.1: Actin depolymerizing proteins [55753] (3 families) (S)
  5. 2534418Family d.109.1.0: automated matches [191561] (1 protein)
    not a true family
  6. 2534419Protein automated matches [190971] (12 species)
    not a true protein

Species:

  1. 2534420Fruit fly (Drosophila melanogaster) [TaxId:7227] [277269] (1 PDB entry)
  2. 2534422Horse (Equus caballus) [TaxId:9796] [255171] (1 PDB entry)
  3. 2534435Human (Homo sapiens) [TaxId:9606] [188619] (3 PDB entries)
    1. Domains for 2fh4:
      1. 2534437Domain d2fh4a1: 2fh4 A:412-532 [133468]
        automated match to d1npha1
      2. 2534438Domain d2fh4a2: 2fh4 A:533-628 [133469]
        automated match to d1npha2
      3. 2534439Domain d2fh4a3: 2fh4 A:629-741 [133470]
        automated match to d1npha3
      4. 2534440Domain d2fh4b1: 2fh4 B:414-532 [133471]
        automated match to d1npha1
      5. 2534441Domain d2fh4b2: 2fh4 B:533-628 [133472]
        automated match to d1npha2
      6. 2534442Domain d2fh4b3: 2fh4 B:629-741 [133473]
        automated match to d1npha3
      7. 2534443Domain d2fh4c1: 2fh4 C:414-532 [133474]
        automated match to d1npha1
      8. 2534444Domain d2fh4c2: 2fh4 C:533-628 [133475]
        automated match to d1npha2
      9. 2534445Domain d2fh4c3: 2fh4 C:629-741 [133476]
        automated match to d1npha3
    2. Domain for 2w0i:
    3. Domains for 3fg6:
      1. 2534446Domain d3fg6a1: 3fg6 A:396-494 [246130]
        automated match to d1npha1
        complexed with ca
      2. 2534447Domain d3fg6a2: 3fg6 A:511-603 [246131]
        automated match to d1npha2
        complexed with ca
      3. 2534448Domain d3fg6a3: 3fg6 A:604-715 [246132]
        automated match to d1npha3
        complexed with ca
      4. 2534449Domain d3fg6b1: 3fg6 B:396-494 [246133]
        automated match to d1npha1
        complexed with ca
      5. 2534450Domain d3fg6b2: 3fg6 B:511-603 [246134]
        automated match to d1npha2
        complexed with ca
      6. 2534451Domain d3fg6b3: 3fg6 B:604-715 [246135]
        automated match to d1npha3
        complexed with ca
      7. 2534452Domain d3fg6c1: 3fg6 C:396-494 [246136]
        automated match to d1npha1
        complexed with ca
      8. 2534453Domain d3fg6c2: 3fg6 C:511-603 [246137]
        automated match to d1npha2
        complexed with ca
      9. 2534454Domain d3fg6c3: 3fg6 C:604-712 [246138]
        automated match to d1npha3
        complexed with ca
      10. 2534455Domain d3fg6d1: 3fg6 D:396-494 [246139]
        automated match to d1npha1
        complexed with ca
      11. 2534456Domain d3fg6d2: 3fg6 D:511-603 [246140]
        automated match to d1npha2
        complexed with ca
      12. 2534457Domain d3fg6d3: 3fg6 D:604-712 [246141]
        automated match to d1npha3
        complexed with ca
      13. 2534458Domain d3fg6e1: 3fg6 E:396-494 [246142]
        automated match to d1npha1
        complexed with ca
      14. 2534459Domain d3fg6e2: 3fg6 E:511-603 [246143]
        automated match to d1npha2
        complexed with ca
      15. 2534460Domain d3fg6e3: 3fg6 E:613-715 [246144]
        automated match to d1npha3
        complexed with ca
      16. 2534461Domain d3fg6f1: 3fg6 F:396-494 [246145]
        automated match to d1npha1
        complexed with ca
      17. 2534462Domain d3fg6f2: 3fg6 F:511-603 [246146]
        automated match to d1npha2
        complexed with ca
      18. 2534463Domain d3fg6f3: 3fg6 F:604-715 [246147]
        automated match to d1npha3
        complexed with ca
      19. 2534464Domain d3fg6g1: 3fg6 G:396-494 [246148]
        automated match to d1npha1
        complexed with ca
      20. 2534465Domain d3fg6g2: 3fg6 G:511-603 [246149]
        automated match to d1npha2
        complexed with ca
      21. 2534466Domain d3fg6g3: 3fg6 G:604-715 [246150]
        automated match to d1npha3
        complexed with ca
      22. 2534467Domain d3fg6h1: 3fg6 H:396-494 [246151]
        automated match to d1npha1
        complexed with ca
      23. 2534468Domain d3fg6h2: 3fg6 H:511-603 [246152]
        automated match to d1npha2
        complexed with ca
      24. 2534469Domain d3fg6h3: 3fg6 H:604-715 [246153]
        automated match to d1npha3
        complexed with ca
  4. 2534470Leishmania donovani [TaxId:5661] [255381] (2 PDB entries)
    1. Domain for 2kd5:
    2. Domain for 2kvk:
  5. 2534473Malaria parasite (Plasmodium falciparum) [TaxId:5833] [226159] (1 PDB entry)
  6. 2534475Mouse (Mus musculus) [TaxId:10090] [225486] (2 PDB entries)
    1. Domain for 2hd7:
    2. Domain for 3daw:
  7. 2534478Nematode (Caenorhabditis elegans) [TaxId:6239] [255468] (3 PDB entries)
    1. Domain for 2lrb:
    2. Domain for 2lxx:
    3. Domain for 2mp4:
  8. 2534482Plasmodium berghei [TaxId:5821] [189993] (1 PDB entry)
  9. 2534485Plasmodium falciparum [TaxId:137071] [226143] (1 PDB entry)
  10. 2534487Streptomyces griseoflavus [TaxId:35619] [332372] (1 PDB entry)
  11. 2534490Toxoplasma gondii [TaxId:5811] [255410] (1 PDB entry)
  12. 2534492Trypanosome (Trypanosoma brucei) [TaxId:5691] [255441] (1 PDB entry)

More info for Protein automated matches from d.109.1.0: automated matches

Timeline for Protein automated matches from d.109.1.0: automated matches: