Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2970038Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 2970344Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families) (S)
    alpha-beta(2)-alpha(2)-beta(3)
  5. 2970499Family d.110.3.6: Flavin-binding PAS domain [88853] (4 proteins)
    contains PAC motif
  6. 2970518Protein automated matches [190943] (2 species)
    not a true protein

Species:

  1. 2970519Human (Homo sapiens) [TaxId:9606] [196723] (5 PDB entries)
    1. Domain for 2l0w:
    2. Domain for 2l1m:
    3. Domain for 2l4r:
    4. Domain for 4hp9:
    5. Domain for 4hqa:
  2. 2970525Thale cress (Arabidopsis thaliana) [TaxId:3702] [188509] (20 PDB entries)
    1. Domains for 2z6d:
      1. 2970533Domain d2z6da_: 2z6d A: [171070]
        automated match to d1n9la_
        complexed with fmn
      2. 2970534Domain d2z6db_: 2z6d B: [171071]
        automated match to d1n9la_
        complexed with fmn
    2. Domain for 4eep:
    3. Domain for 4eer:
    4. Domain for 4ees:
    5. Domains for 4eet:
      1. 2970526Domain d4eetb_: 4eet B: [220461]
        automated match to d4eesa_
        complexed with fmn
      2. 2970527Domain d4eetd_: 4eet D: [220462]
        automated match to d4eesa_
        complexed with fmn
    6. Domain for 4eeu:
    7. Domains for 4nxb:
      1. 2970549Domain d4nxba1: 4nxb A:389-496 [266989]
        Other proteins in same PDB: d4nxba2
        automated match to d4eesa_
        complexed with fmn
      2. 2970550Domain d4nxbb_: 4nxb B: [266990]
        Other proteins in same PDB: d4nxba2
        automated match to d4eesa_
        complexed with fmn
    8. Domains for 4nxe:
      1. 2970544Domain d4nxea_: 4nxe A: [266991]
        automated match to d4eesa_
        complexed with fmn
      2. 2970545Domain d4nxeb_: 4nxe B: [266992]
        automated match to d4eesa_
        complexed with fmn
    9. Domains for 4nxf:
      1. 2970535Domain d4nxfa_: 4nxf A: [259840]
        automated match to d4eesa_
        complexed with fmn
      2. 2970536Domain d4nxfb_: 4nxf B: [259841]
        automated match to d4eesa_
        complexed with fmn
    10. Domains for 4nxg:
      1. 2970542Domain d4nxga_: 4nxg A: [266993]
        automated match to d4eesa_
        complexed with fmn
      2. 2970543Domain d4nxgb_: 4nxg B: [266994]
        automated match to d4eesa_
        complexed with fmn
    11. Domain for 6gpu:
    12. Domain for 6gpv:
    13. Domain for 6qqh:
    14. Domain for 6qqi:
    15. Domain for 6qqj:
    16. Domain for 6qqk:
    17. Domain for 6qsa:
    18. Domain for 6s45:
    19. Domain for 6s46:
    20. Domain for 7aby:

More info for Protein automated matches from d.110.3.6: Flavin-binding PAS domain

Timeline for Protein automated matches from d.110.3.6: Flavin-binding PAS domain: