Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2566512Fold d.299: Ns1 effector domain-like [143020] (1 superfamily)
    beta-X-beta(5)-alpha-beta-alpha; 2 layers: a/b; bifurcated beta-sheet; order 23654[1,7]
  4. 2566513Superfamily d.299.1: Ns1 effector domain-like [143021] (1 family) (S)
    automatically mapped to Pfam PF00600
  5. 2566514Family d.299.1.1: Ns1 effector domain-like [143022] (2 protein domains)
    C-terminal part of Pfam PF00600
  6. 2566519Protein automated matches [190936] (6 species)
    not a true protein

Species:

  1. 2566520Influenza A virus (a/california/07/2009(h1n1)) [TaxId:641809] [189299] (1 PDB entry)
  2. 2566527Influenza A virus (a/udorn/307/1972(h3n2)) [TaxId:381517] [188730] (12 PDB entries)
    1. Domains for 3d6r:
      1. 2566529Domain d3d6ra_: 3d6r A: [209031]
        automated match to d3kwgb_
      2. 2566530Domain d3d6rb1: 3d6r B:83-202 [209032]
        automated match to d3kwgb_
    2. Domains for 3ee8:
      1. 2566549Domain d3ee8a_: 3ee8 A: [174883]
        automated match to d2gx9a1
      2. 2566550Domain d3ee8b_: 3ee8 B: [174884]
        automated match to d2gx9a1
    3. Domains for 3ee9:
      1. 2566541Domain d3ee9a_: 3ee9 A: [174885]
        automated match to d2gx9a1
        complexed with so4
      2. 2566542Domain d3ee9b_: 3ee9 B: [174886]
        automated match to d2gx9a1
        complexed with so4
    4. Domains for 3kwg:
      1. 2566533Domain d3kwga_: 3kwg A: [179750]
        Other proteins in same PDB: d3kwgb2
        automated match to d2gx9a1
        mutant
      2. 2566534Domain d3kwgb1: 3kwg B:74-205 [179751]
        Other proteins in same PDB: d3kwgb2
        automated match to d2gx9a1
        mutant
    5. Domains for 3kwi:
      1. 2566535Domain d3kwia_: 3kwi A: [179752]
        automated match to d2gx9a1
        mutant
      2. 2566536Domain d3kwib_: 3kwi B: [179753]
        automated match to d2gx9a1
        mutant
    6. Domains for 3l4q:
      1. 2566545Domain d3l4qa_: 3l4q A: [247332]
        Other proteins in same PDB: d3l4qc_, d3l4qd_
        automated match to d3kwgb_
        complexed with gol
      2. 2566546Domain d3l4qb_: 3l4q B: [247333]
        Other proteins in same PDB: d3l4qc_, d3l4qd_
        automated match to d3kwgb_
        complexed with gol
    7. Domains for 3o9q:
      1. 2566543Domain d3o9qa_: 3o9q A: [214251]
        automated match to d3kwgb_
        mutant
      2. 2566544Domain d3o9qb_: 3o9q B: [214252]
        automated match to d3kwgb_
        mutant
    8. Domains for 3o9r:
      1. 2566531Domain d3o9ra_: 3o9r A: [214253]
        automated match to d3kwgb_
        mutant
      2. 2566532Domain d3o9rb_: 3o9r B: [214254]
        automated match to d3kwgb_
        mutant
    9. Domains for 3o9s:
      1. 2566539Domain d3o9sa_: 3o9s A: [214255]
        automated match to d3kwgb_
      2. 2566540Domain d3o9sb_: 3o9s B: [214256]
        automated match to d3kwgb_
    10. Domains for 3o9t:
      1. 2566537Domain d3o9ta_: 3o9t A: [214257]
        automated match to d3kwgb_
        complexed with p6g
      2. 2566538Domain d3o9tb_: 3o9t B: [214258]
        automated match to d3kwgb_
        complexed with p6g
    11. Domains for 3oa9:
      1. 2566547Domain d3oa9a_: 3oa9 A: [214268]
        automated match to d3kwgb_
      2. 2566548Domain d3oa9b_: 3oa9 B: [214269]
        automated match to d3kwgb_
    12. Domain for 3rvc:
  3. 2566551Influenza A virus [TaxId:221021] [255355] (1 PDB entry)
  4. 2566553Influenza A virus [TaxId:680789] [189731] (3 PDB entries)
    1. Domains for 3p31:
      1. 2566554Domain d3p31a_: 3p31 A: [183479]
        automated match to d2gx9a1
        complexed with scn
      2. 2566555Domain d3p31b_: 3p31 B: [183480]
        automated match to d2gx9a1
        complexed with scn
      3. 2566556Domain d3p31c_: 3p31 C: [183481]
        automated match to d2gx9a1
        complexed with scn
      4. 2566557Domain d3p31d_: 3p31 D: [183482]
        automated match to d2gx9a1
        complexed with scn
    2. Domains for 3p38:
      1. 2566558Domain d3p38a_: 3p38 A: [183483]
        automated match to d2gx9a1
        mutant
      2. 2566559Domain d3p38b_: 3p38 B: [183484]
        automated match to d2gx9a1
        mutant
      3. 2566560Domain d3p38c_: 3p38 C: [183485]
        automated match to d2gx9a1
        mutant
    3. Domains for 3p39:
      1. 2566561Domain d3p39a_: 3p39 A: [248408]
        automated match to d3p38a_
        mutant
      2. 2566562Domain d3p39b_: 3p39 B: [248409]
        automated match to d3p38a_
        mutant
      3. 2566563Domain d3p39c_: 3p39 C: [248410]
        automated match to d3p38a_
        mutant
      4. 2566564Domain d3p39d_: 3p39 D: [248411]
        automated match to d3p38a_
        mutant
      5. 2566565Domain d3p39e_: 3p39 E: [248412]
        automated match to d3p38a_
        mutant
      6. 2566566Domain d3p39f_: 3p39 F: [248413]
        automated match to d3p38a_
        mutant
  5. 2566567Influenza A virus, different strains [TaxId:11320] [188483] (1 PDB entry)
  6. 3052119Influenza a virus (strain a/puerto rico/8/1934 h1n1) [TaxId:211044] [352181] (1 PDB entry)

More info for Protein automated matches from d.299.1.1: Ns1 effector domain-like

Timeline for Protein automated matches from d.299.1.1: Ns1 effector domain-like: