Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2180205Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. 2180206Superfamily d.79.1: YjgF-like [55298] (3 families) (S)
    forms trimers with three closely packed beta-sheets; possibly related to the IspF (d.79.5) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  5. 2180410Family d.79.1.0: automated matches [191544] (1 protein)
    not a true family
  6. 2180411Protein automated matches [190935] (13 species)
    not a true protein

Species:

  1. 2180412Agrobacterium tumefaciens [TaxId:176299] [188481] (1 PDB entry)
  2. 2180425Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [226153] (1 PDB entry)
  3. 2180427Entamoeba (Entamoeba histolytica) [TaxId:5759] [225891] (1 PDB entry)
  4. 2180434Entamoeba histolytica [TaxId:294381] [225859] (2 PDB entries)
    1. Domain for 3m1x:
    2. Domains for 3m4s:
      1. 2180436Domain d3m4sa_: 3m4s A: [213126]
        automated match to d3v4dc_
        complexed with cl
      2. 2180437Domain d3m4sb_: 3m4s B: [213127]
        automated match to d3v4dc_
        complexed with cl
      3. 2180438Domain d3m4sc_: 3m4s C: [213128]
        automated match to d3v4dc_
        complexed with cl
      4. 2180439Domain d3m4sd_: 3m4s D: [213129]
        automated match to d3v4dc_
        complexed with cl
      5. 2180440Domain d3m4se_: 3m4s E: [213130]
        automated match to d3v4dc_
        complexed with cl
      6. 2180441Domain d3m4sf_: 3m4s F: [213131]
        automated match to d3v4dc_
        complexed with cl
  5. 2180442Escherichia coli [TaxId:217992] [196085] (1 PDB entry)
  6. 2180449Mycobacterium tuberculosis [TaxId:83332] [225825] (1 PDB entry)
  7. 2180451Pseudomonas syringae [TaxId:323] [196440] (1 PDB entry)
  8. 2180455Rhodopseudomonas palustris [TaxId:1076] [189252] (1 PDB entry)
  9. 2180468Streptococcus mutans [TaxId:210007] [189584] (1 PDB entry)
  10. 2180478uncultured organism [TaxId:155900] [189680] (1 PDB entry)
  11. 2180485Vibrio vulnificus [TaxId:216895] [226289] (1 PDB entry)
  12. 2280603Arabidopsis thaliana [TaxId:3702] [323904] (2 PDB entries)
    1. Domain for 5hp7:
    2. Domains for 5hp8:
      1. 2280604Domain d5hp8a_: 5hp8 A: [323905]
        automated match to d3l7qa_
        complexed with pyr
      2. 2280619Domain d5hp8c_: 5hp8 C: [323920]
        automated match to d3l7qa_
        complexed with pyr
      3. 2280626Domain d5hp8b_: 5hp8 B: [323927]
        automated match to d3l7qa_
        complexed with pyr
  13. 2289473Yersinia pestis [TaxId:632] [332774] (1 PDB entry)

More info for Protein automated matches from d.79.1.0: automated matches

Timeline for Protein automated matches from d.79.1.0: automated matches: