Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2403751Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2404605Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 2404704Family b.82.2.3: Gab protein (hypothetical protein YgaT) [63855] (2 proteins)
    automatically mapped to Pfam PF08943
  6. 2404709Protein automated matches [190931] (3 species)
    not a true protein

Species:

  1. 2404710Escherichia coli [TaxId:562] [188460] (1 PDB entry)
  2. 3061041Escherichia coli [TaxId:83333] [361103] (2 PDB entries)
    1. Domains for 6gpe:
      1. 3061042Domain d6gpeb_: 6gpe B: [361104]
        automated match to d1jr7a_
        complexed with fe2
      2. 3061043Domain d6gpea_: 6gpe A: [361105]
        automated match to d1jr7a_
        complexed with fe2
    2. Domains for 6hl8:
      1. 3061082Domain d6hl8a_: 6hl8 A: [361144]
        automated match to d1jr7a_
        complexed with fe2, gua
      2. 3061088Domain d6hl8b_: 6hl8 B: [361150]
        automated match to d1jr7a_
        complexed with fe2, gua
  3. 3063167Escherichia coli [TaxId:656397] [363229] (2 PDB entries)
    1. Domains for 6gpn:
      1. 3063168Domain d6gpnb_: 6gpn B: [363230]
        automated match to d1jr7a_
        complexed with fe2, oga
      2. 3063183Domain d6gpna_: 6gpn A: [363245]
        automated match to d1jr7a_
        complexed with fe2, oga
    2. Domains for 6hl9:
      1. 3065046Domain d6hl9a_: 6hl9 A: [365108]
        automated match to d1jr7a_
        complexed with fe2, sin
      2. 3065054Domain d6hl9b_: 6hl9 B: [365116]
        automated match to d1jr7a_
        complexed with fe2, sin

More info for Protein automated matches from b.82.2.3: Gab protein (hypothetical protein YgaT)

Timeline for Protein automated matches from b.82.2.3: Gab protein (hypothetical protein YgaT):