Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2340140Fold a.139: Type I dockerin domain [63445] (1 superfamily)
    tandem repeat of two calcium-binding loop-helix motifs, distinct from the EF-hand
  4. 2340141Superfamily a.139.1: Type I dockerin domain [63446] (2 families) (S)
  5. 2340159Family a.139.1.0: automated matches [191542] (1 protein)
    not a true family
  6. 2340160Protein automated matches [190928] (7 species)
    not a true protein

Species:

  1. 2340161Acetivibrio cellulolyticus [TaxId:35830] [271532] (6 PDB entries)
    1. Domain for 4u3s:
    2. Domains for 4uyp:
      1. 2340162Domain d4uypb_: 4uyp B: [301038]
        Other proteins in same PDB: d4uypa1, d4uypa2, d4uypa3, d4uypc1, d4uypc2, d4uypc3
        automated match to d4uyqb_
        complexed with ca, epe, mpd, so4; mutant
      2. 2340163Domain d4uypd_: 4uyp D: [301041]
        Other proteins in same PDB: d4uypa1, d4uypa2, d4uypa3, d4uypc1, d4uypc2, d4uypc3
        automated match to d4uyqb_
        complexed with ca, epe, mpd, so4; mutant
    3. Domain for 4uyq:
    4. Domain for 4wi0:
    5. Domains for 5nrk:
      1. 3046866Domain d5nrkd_: 5nrk D: [346928]
        Other proteins in same PDB: d5nrka1, d5nrka2, d5nrkc1, d5nrkc2
        automated match to d4uyqb_
        complexed with ca, gol, scn; mutant
      2. 3047057Domain d5nrkb_: 5nrk B: [347119]
        Other proteins in same PDB: d5nrka1, d5nrka2, d5nrkc1, d5nrkc2
        automated match to d4uyqb_
        complexed with ca, gol, scn; mutant
    6. Domain for 5nrm:
  2. 2340167Bacteroides cellulosolvens [TaxId:35825] [189868] (1 PDB entry)
  3. 2340170Clostridium cellulolyticum [TaxId:1521] [188438] (2 PDB entries)
    1. Domains for 2vn5:
      1. 2340172Domain d2vn5b_: 2vn5 B: [161584]
        Other proteins in same PDB: d2vn5a_, d2vn5c_
        automated match to d1daqa_
        complexed with ca
      2. 2340173Domain d2vn5d_: 2vn5 D: [161585]
        Other proteins in same PDB: d2vn5a_, d2vn5c_
        automated match to d1daqa_
        complexed with ca
    2. Domain for 2vn6:
  4. 2340174Clostridium thermocellum [TaxId:1249482] [332378] (1 PDB entry)
  5. 2340176Clostridium thermocellum [TaxId:1515] [256259] (1 PDB entry)
  6. 2340181Clostridium thermocellum [TaxId:203119] [194257] (4 PDB entries)
    1. Domain for 3ul4:
    2. Domains for 4dh2:
      1. 2340182Domain d4dh2b_: 4dh2 B: [262692]
        Other proteins in same PDB: d4dh2a1, d4dh2a2, d4dh2c1, d4dh2c2
        automated match to d4fl4g_
        complexed with ca, so4
      2. 2340183Domain d4dh2d_: 4dh2 D: [262693]
        Other proteins in same PDB: d4dh2a1, d4dh2a2, d4dh2c1, d4dh2c2
        automated match to d4fl4g_
        complexed with ca, so4
    3. Domain for 5g5d:
    4. Domain for 5m0y:
  7. 2340187Clostridium thermocellum [TaxId:492476] [311325] (1 PDB entry)

More info for Protein automated matches from a.139.1.0: automated matches

Timeline for Protein automated matches from a.139.1.0: automated matches: