SCOPe 2.02: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.02
Class b: All beta proteins [48724] (174 folds)
Fold b.38: Sm-like fold [50181] (5 superfamilies)
core: barrel, open; n*=4, S*=8; meander; SH3-like topology
Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families)
Family b.38.1.0: automated matches [191538] (1 protein)
not a true family
Protein automated matches [190914] (4 species)
not a true protein

Species:

Bacillus subtilis [TaxId:1423] [189371] (2 PDB entries)
1. Domain for 3ahu:
  - Domain d3ahuc_: 3ahu C: [193699]
    automated match to d3hsbd_
    protein/RNA complex
2. Domain for 3hsb:
  - Domain d3hsbd_: 3hsb D: [177805]
    automated match to d1kq1h_
    protein/RNA complex
Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [188389] (1 PDB entry)
- Domains for 3bw1:
  1. Domain d3bw1a_: 3bw1 A: [172872]
    automated match to d1i81d_
    complexed with mpd, so4
  2. Domain d3bw1b_: 3bw1 B: [172873]
    automated match to d1i81d_
    complexed with mpd, so4
Homo sapiens [TaxId:9606] [196227] (1 PDB entry)
- Domain for 3s6n:
  - Domain d3s6nf_: 3s6n F: [196228]
    automated match to d1n9sc_
    protein/RNA complex
Schizosaccharomyces pombe [TaxId:284812] [189773] (3 PDB entries)
1. Domains for 3swn:
  1. Domain d3swna_: 3swn A: [185569]
    automated match to d2fwka1
    protein/RNA complex; complexed with zn
  2. Domain d3swnb_: 3swn B: [185570]
    automated match to d1n9sc_
    protein/RNA complex; complexed with zn
  3. Domain d3swnd_: 3swn D: [185571]
    automated match to d2fwka1
    protein/RNA complex; complexed with zn
  4. Domain d3swne_: 3swn E: [185572]
    automated match to d1n9sc_
    protein/RNA complex; complexed with zn
  5. Domain d3swnp_: 3swn P: [185573]
    automated match to d2fwka1
    protein/RNA complex; complexed with zn
  6. Domain d3swnq_: 3swn Q: [185574]
    automated match to d1n9sc_
    protein/RNA complex; complexed with zn
  7. Domain d3swns_: 3swn S: [185575]
    automated match to d2fwka1
    protein/RNA complex; complexed with zn
  8. Domain d3swnt_: 3swn T: [185576]
    automated match to d1n9sc_
    protein/RNA complex; complexed with zn
2. Domains for 4emg:
  1. Domain d4emga_: 4emg A: [195155]
    automated match to d3bw1a_
  2. Domain d4emgb_: 4emg B: [195153]
    automated match to d3bw1a_
  3. Domain d4emgc_: 4emg C: [195152]
    automated match to d3bw1a_
  4. Domain d4emgd_: 4emg D: [195158]
    automated match to d3bw1a_
  5. Domain d4emge_: 4emg E: [195157]
    automated match to d3bw1a_
  6. Domain d4emgf_: 4emg F: [195156]
    automated match to d3bw1a_
  7. Domain d4emgg_: 4emg G: [195154]
    automated match to d3bw1a_
  8. Domain d4emgh_: 4emg H: [195148]
    automated match to d3bw1a_
  9. Domain d4emgi_: 4emg I: [195144]
    automated match to d3bw1a_
  10. Domain d4emgj_: 4emg J: [195147]
    automated match to d3bw1a_
  11. Domain d4emgk_: 4emg K: [195146]
    automated match to d3bw1a_
  12. Domain d4emgl_: 4emg L: [195151]
    automated match to d3bw1a_
  13. Domain d4emgm_: 4emg M: [195150]
    automated match to d3bw1a_
  14. Domain d4emgn_: 4emg N: [195149]
    automated match to d3bw1a_
3. Domains for 4emk:
  1. Domain d4emka_: 4emk A: [195160]
    automated match to d3swna_
  2. Domain d4emkb_: 4emk B: [195159]
    automated match to d3swnq_

More info for Protein automated matches from b.38.1.0: automated matches

Timeline for Protein automated matches from b.38.1.0: automated matches:

Protein automated matches from b.38.1.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from b.38.1.0: automated matches appears in SCOPe 2.03
Protein automated matches from b.38.1.0: automated matches appears in the current release, SCOPe 2.08