Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1253684Class a: All alpha proteins [46456] (284 folds)
  3. 1268060Fold a.35: lambda repressor-like DNA-binding domains [47412] (1 superfamily)
    core: 4 helices; folded leaf, closed
  4. 1268061Superfamily a.35.1: lambda repressor-like DNA-binding domains [47413] (14 families) (S)
  5. 1268494Family a.35.1.0: automated matches [191534] (1 protein)
    not a true family
  6. 1268495Protein automated matches [190907] (3 species)
    not a true protein

Species:

  1. 1268496Enterobacter sp. [TaxId:211595] [189872] (11 PDB entries)
    1. Domains for 3clc:
      1. 1268537Domain d3clca_: 3clc A: [173309]
        automated match to d2b5ad1
        protein/DNA complex; complexed with mg
      2. 1268538Domain d3clcb_: 3clc B: [173310]
        automated match to d2b5ad1
        protein/DNA complex; complexed with mg
      3. 1268539Domain d3clcc_: 3clc C: [173311]
        automated match to d2b5ad1
        protein/DNA complex; complexed with mg
      4. 1268540Domain d3clcd_: 3clc D: [173312]
        automated match to d2b5ad1
        protein/DNA complex; complexed with mg
    2. Domains for 3g5g:
      1. 1268523Domain d3g5ga_: 3g5g A: [210383]
        automated match to d4f8da_
      2. 1268524Domain d3g5gb_: 3g5g B: [210384]
        automated match to d4f8da_
      3. 1268525Domain d3g5gc_: 3g5g C: [210385]
        automated match to d4f8da_
      4. 1268526Domain d3g5gd_: 3g5g D: [210386]
        automated match to d4f8da_
      5. 1268527Domain d3g5ge_: 3g5g E: [210387]
        automated match to d4f8da_
      6. 1268528Domain d3g5gf_: 3g5g F: [210388]
        automated match to d4f8da_
      7. 1268529Domain d3g5gg_: 3g5g G: [210389]
        automated match to d4f8da_
      8. 1268530Domain d3g5gh_: 3g5g H: [210390]
        automated match to d4f8da_
      9. 1268531Domain d3g5gi_: 3g5g I: [210391]
        automated match to d4f8da_
      10. 1268532Domain d3g5gj_: 3g5g J: [210392]
        automated match to d4f8da_
      11. 1268533Domain d3g5gk_: 3g5g K: [210393]
        automated match to d4f8da_
      12. 1268534Domain d3g5gl_: 3g5g L: [210394]
        automated match to d4f8da_
      13. 1268535Domain d3g5gm_: 3g5g M: [210395]
        automated match to d4f8da_
      14. 1268536Domain d3g5gn_: 3g5g N: [210396]
        automated match to d4f8da_
    3. Domains for 3s8q:
      1. 1268507Domain d3s8qa_: 3s8q A: [185316]
        automated match to d2b5ad1
        protein/DNA complex
      2. 1268508Domain d3s8qb_: 3s8q B: [185317]
        automated match to d2b5ad1
        protein/DNA complex
    4. Domains for 4f8d:
      1. 1268501Domain d4f8da_: 4f8d A: [196769]
        automated match to d3s8qb_
        complexed with na, so4; mutant
      2. 1268502Domain d4f8db_: 4f8d B: [202020]
        automated match to d4f8da_
        complexed with na, so4; mutant
    5. Domains for 4fbi:
      1. 1268497Domain d4fbia_: 4fbi A: [221102]
        automated match to d4f8da_
        complexed with gol; mutant
      2. 1268498Domain d4fbib_: 4fbi B: [221103]
        automated match to d4f8da_
        complexed with gol; mutant
      3. 1268499Domain d4fbic_: 4fbi C: [221104]
        automated match to d4f8da_
        complexed with gol; mutant
      4. 1268500Domain d4fbid_: 4fbi D: [221105]
        automated match to d4f8da_
        complexed with gol; mutant
    6. Domains for 4fn3:
      1. 1268505Domain d4fn3a_: 4fn3 A: [197160]
        automated match to d3s8qb_
        complexed with so4; mutant
      2. 1268506Domain d4fn3b_: 4fn3 B: [197153]
        automated match to d3s8qb_
        complexed with so4; mutant
    7. Domains for 4i6r:
      1. 1268503Domain d4i6ra_: 4i6r A: [228933]
        automated match to d3s8qb_
        complexed with gol, so4
      2. 1268504Domain d4i6rb_: 4i6r B: [228932]
        automated match to d3s8qb_
        complexed with gol, so4
    8. Domains for 4i6t:
      1. 1268517Domain d4i6ta_: 4i6t A: [234820]
        automated match to d4i6tb_
        complexed with mli; mutant
      2. 1268518Domain d4i6tb_: 4i6t B: [228934]
        automated match to d3g5gb_
        complexed with mli; mutant
    9. Domains for 4i6u:
      1. 1268511Domain d4i6ua_: 4i6u A: [234822]
        automated match to d4i6ue_
        complexed with act, gol, na, peg; mutant
      2. 1268512Domain d4i6ub_: 4i6u B: [234821]
        automated match to d4i6ue_
        complexed with act, gol, na, peg; mutant
      3. 1268513Domain d4i6uc_: 4i6u C: [234823]
        automated match to d4i6ue_
        complexed with act, gol, na, peg; mutant
      4. 1268514Domain d4i6ud_: 4i6u D: [234824]
        automated match to d4i6ue_
        complexed with act, gol, na, peg; mutant
      5. 1268515Domain d4i6ue_: 4i6u E: [228931]
        automated match to d3g5gb_
        complexed with act, gol, na, peg; mutant
      6. 1268516Domain d4i6uf_: 4i6u F: [234825]
        automated match to d4i6ue_
        complexed with act, gol, na, peg; mutant
    10. Domains for 4ia8:
      1. 1268509Domain d4ia8a_: 4ia8 A: [234841]
        automated match to d4ia8b_
        complexed with so4; mutant
      2. 1268510Domain d4ia8b_: 4ia8 B: [229588]
        automated match to d3g5gb_
        complexed with so4; mutant
    11. Domains for 4iwr:
      1. 1268519Domain d4iwra_: 4iwr A: [227872]
        automated match to d3clca_
        protein/DNA complex
      2. 1268520Domain d4iwrb_: 4iwr B: [227873]
        automated match to d3clca_
        protein/DNA complex
      3. 1268521Domain d4iwre_: 4iwr E: [227870]
        automated match to d3clca_
        protein/DNA complex
      4. 1268522Domain d4iwrf_: 4iwr F: [227871]
        automated match to d3clca_
        protein/DNA complex
  2. 1268541Mouse (Mus musculus) [TaxId:10090] [226005] (1 PDB entry)
  3. 1268543Pseudomonas fluorescens [TaxId:220664] [188360] (1 PDB entry)

More info for Protein automated matches from a.35.1.0: automated matches

Timeline for Protein automated matches from a.35.1.0: automated matches: