Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2526467Fold d.80: Tautomerase/MIF [55330] (1 superfamily)
    (beta-alpha-beta)2; 2 layers: alpha/beta; mixed beta-sheet
    generally forms trimers with three closely packed beta-sheets
  4. 2526468Superfamily d.80.1: Tautomerase/MIF [55331] (7 families) (S)
  5. 2527000Family d.80.1.0: automated matches [191533] (1 protein)
    not a true family
  6. 2527001Protein automated matches [190903] (19 species)
    not a true protein

Species:

  1. 2527002Ancylostoma ceylanicum [TaxId:53326] [188849] (3 PDB entries)
    1. Domains for 2os5:
      1. 2527003Domain d2os5a_: 2os5 A: [198221]
        automated match to d2os5d_
        complexed with so4
      2. 2527004Domain d2os5b_: 2os5 B: [198222]
        automated match to d2os5d_
        complexed with so4
      3. 2527005Domain d2os5c_: 2os5 C: [198223]
        automated match to d2os5d_
        complexed with so4
      4. 2527006Domain d2os5d_: 2os5 D: [166837]
        automated match to d1mffa_
        complexed with so4
    2. Domains for 3rf4:
      1. 2527007Domain d3rf4a_: 3rf4 A: [184931]
        automated match to d1mffa_
        complexed with act, fun, imd, zn
      2. 2527008Domain d3rf4b_: 3rf4 B: [184932]
        automated match to d1mffa_
        complexed with act, fun, imd, zn
      3. 2527009Domain d3rf4c_: 3rf4 C: [184933]
        automated match to d1mffa_
        complexed with act, fun, imd, zn
    3. Domains for 3rf5:
      1. 2527010Domain d3rf5a_: 3rf5 A: [184934]
        automated match to d1mffa_
        complexed with act, fuz, imd, zn
      2. 2527011Domain d3rf5b_: 3rf5 B: [184935]
        automated match to d1mffa_
        complexed with act, fuz, imd, zn
      3. 2527012Domain d3rf5c_: 3rf5 C: [184936]
        automated match to d1mffa_
        complexed with act, fuz, imd, zn
  2. 2527013Bacillus subtilis [TaxId:1423] [188341] (2 PDB entries)
    1. Domains for 2op8:
      1. 2527014Domain d2op8a_: 2op8 A: [166811]
        automated match to d1otfa_
      2. 2527015Domain d2op8b_: 2op8 B: [166812]
        automated match to d1otfa_
    2. Domains for 2opa:
      1. 2527016Domain d2opaa_: 2opa A: [166813]
        automated match to d1otfa_
        complexed with fhc
      2. 2527017Domain d2opab_: 2opa B: [166814]
        automated match to d1otfa_
        complexed with fhc
  3. 2527018Bordetella bronchiseptica [TaxId:257310] [256334] (1 PDB entry)
  4. 2527022Burkholderia lata [TaxId:482957] [332738] (1 PDB entry)
  5. 2527029Coryneform bacterium [TaxId:1728] [189898] (4 PDB entries)
    1. Domains for 3mjz:
      1. 2527052Domain d3mjza_: 3mjz A: [181309]
        automated match to d2aaga1
      2. 2527053Domain d3mjzb_: 3mjz B: [181310]
        automated match to d2aaga1
      3. 2527054Domain d3mjzc_: 3mjz C: [181311]
        automated match to d2aaga1
      4. 2527055Domain d3mjzd_: 3mjz D: [181312]
        automated match to d2aaga1
      5. 2527056Domain d3mjze_: 3mjz E: [181313]
        automated match to d2aaga1
      6. 2527057Domain d3mjzf_: 3mjz F: [181314]
        automated match to d2aaga1
      7. 2527058Domain d3mjzg_: 3mjz G: [181315]
        automated match to d2aaga1
      8. 2527059Domain d3mjzh_: 3mjz H: [181316]
        automated match to d2aaga1
      9. 2527060Domain d3mjzi_: 3mjz I: [181317]
        automated match to d2aaga1
      10. 2527061Domain d3mjzj_: 3mjz J: [181318]
        automated match to d2aaga1
      11. 2527062Domain d3mjzk_: 3mjz K: [181319]
        automated match to d2aaga1
      12. 2527063Domain d3mjzl_: 3mjz L: [181320]
        automated match to d2aaga1
    2. Domains for 3mlc:
      1. 2527047Domain d3mlca_: 3mlc A: [181380]
        automated match to d2aaga1
        complexed with pr6
      2. 2527048Domain d3mlcb_: 3mlc B: [181381]
        automated match to d2aaga1
        complexed with pr6
      3. 2527049Domain d3mlcc_: 3mlc C: [181382]
        automated match to d2aaga1
        complexed with pr6
      4. 2527050Domain d3mlcd_: 3mlc D: [181383]
        automated match to d2aaga1
        complexed with pr6
      5. 2527051Domain d3mlce_: 3mlc E: [181384]
        automated match to d2aaga1
        complexed with pr6
    3. Domains for 4lho:
      1. 2527042Domain d4lhoa_: 4lho A: [224668]
        automated match to d3mjza_
        complexed with po4, pr6
      2. 2527043Domain d4lhob_: 4lho B: [224669]
        automated match to d3mjza_
        complexed with po4, pr6
      3. 2527044Domain d4lhoc_: 4lho C: [224670]
        automated match to d3mjza_
        complexed with po4, pr6
      4. 2527045Domain d4lhod_: 4lho D: [224671]
        automated match to d3mjza_
        complexed with po4, pr6
      5. 2527046Domain d4lhoe_: 4lho E: [224672]
        automated match to d3mjza_
        complexed with po4, pr6
    4. Domains for 4lhp:
      1. 2527030Domain d4lhpa_: 4lhp A: [224673]
        automated match to d3mjza_
        complexed with po4, so4
      2. 2527031Domain d4lhpb_: 4lhp B: [224674]
        automated match to d3mjza_
        complexed with po4, so4
      3. 2527032Domain d4lhpc_: 4lhp C: [224675]
        automated match to d3mjza_
        complexed with po4, so4
      4. 2527033Domain d4lhpd_: 4lhp D: [224676]
        automated match to d3mjza_
        complexed with po4, so4
      5. 2527034Domain d4lhpe_: 4lhp E: [224677]
        automated match to d3mjza_
        complexed with po4, so4
      6. 2527035Domain d4lhpf_: 4lhp F: [224678]
        automated match to d3mjza_
        complexed with po4, so4
      7. 2527036Domain d4lhpg_: 4lhp G: [224679]
        automated match to d3mjza_
        complexed with po4, so4
      8. 2527037Domain d4lhph_: 4lhp H: [224680]
        automated match to d3mjza_
        complexed with po4, so4
      9. 2527038Domain d4lhpi_: 4lhp I: [224681]
        automated match to d3mjza_
        complexed with po4, so4
      10. 2527039Domain d4lhpj_: 4lhp J: [224682]
        automated match to d3mjza_
        complexed with po4, so4
      11. 2527040Domain d4lhpk_: 4lhp K: [224683]
        automated match to d3mjza_
        complexed with po4, so4
      12. 2527041Domain d4lhpl_: 4lhp L: [224684]
        automated match to d3mjza_
        complexed with po4, so4
  6. 2527064Deinococcus radiodurans [TaxId:243230] [234969] (1 PDB entry)
  7. 2527068Giardia lamblia [TaxId:184922] [226196] (1 PDB entry)
  8. 2527070Helicobacter pylori [TaxId:85963] [231104] (2 PDB entries)
    1. Domains for 2orm:
      1. 2527071Domain d2orma_: 2orm A: [231105]
        automated match to d4faza_
      2. 2527072Domain d2ormb_: 2orm B: [238785]
        automated match to d2orma_
      3. 2527073Domain d2ormc_: 2orm C: [238786]
        automated match to d2orma_
      4. 2527074Domain d2ormd_: 2orm D: [238787]
        automated match to d2orma_
      5. 2527075Domain d2orme_: 2orm E: [238788]
        automated match to d2orma_
      6. 2527076Domain d2ormf_: 2orm F: [238789]
        automated match to d2orma_
    2. Domains for 3m21:
      1. 2527077Domain d3m21a_: 3m21 A: [247579]
        automated match to d2orma_
      2. 2527078Domain d3m21b_: 3m21 B: [247580]
        automated match to d2orma_
      3. 2527079Domain d3m21c_: 3m21 C: [247581]
        automated match to d2orma_
      4. 2527080Domain d3m21d_: 3m21 D: [247582]
        automated match to d2orma_
      5. 2527081Domain d3m21e_: 3m21 E: [247583]
        automated match to d2orma_
      6. 2527082Domain d3m21f_: 3m21 F: [247584]
        automated match to d2orma_
  9. 2527083Leishmania major [TaxId:5664] [225634] (3 PDB entries)
    1. Domain for 3b64:
    2. Domain for 3fwt:
    3. Domain for 3fwu:
  10. 2527087Malaria parasite (Plasmodium falciparum) [TaxId:5833] [260351] (2 PDB entries)
    1. Domains for 4p7m:
      1. 2527091Domain d4p7ma_: 4p7m A: [260352]
        automated match to d2wkbe_
        complexed with 2oe
      2. 2527092Domain d4p7mb_: 4p7m B: [260353]
        automated match to d2wkbe_
        complexed with 2oe
      3. 2527093Domain d4p7mc_: 4p7m C: [263445]
        automated match to d4p7ma_
        complexed with 2oe
    2. Domains for 4p7s:
      1. 2527088Domain d4p7sa_: 4p7s A: [263446]
        automated match to d4p7ma_
        complexed with 2ok
      2. 2527089Domain d4p7sb_: 4p7s B: [260728]
        automated match to d2wkbe_
        complexed with 2ok
      3. 2527090Domain d4p7sc_: 4p7s C: [263447]
        automated match to d4p7ma_
        complexed with 2ok
  11. 2527094Methylibium petroleiphilum [TaxId:420662] [197231] (2 PDB entries)
    1. Domains for 4faz:
      1. 2527095Domain d4faza_: 4faz A: [197232]
        automated match to d1otfa_
        complexed with so4
      2. 2527096Domain d4fazb_: 4faz B: [202026]
        automated match to d4faza_
        complexed with so4
      3. 2527097Domain d4fazc_: 4faz C: [197233]
        automated match to d1otfa_
        complexed with so4
    2. Domains for 4fdx:
      1. 2527098Domain d4fdxa_: 4fdx A: [197298]
        automated match to d4otba_
      2. 2527099Domain d4fdxb_: 4fdx B: [202029]
        automated match to d4fdxa_
  12. 2527100Nostoc sp. [TaxId:103690] [256358] (1 PDB entry)
  13. 2527107Plasmodium berghei [TaxId:5823] [189095] (1 PDB entry)
  14. 2527114Plasmodium falciparum [TaxId:36329] [189094] (1 PDB entry)
  15. 2527117Prochlorococcus marinus [TaxId:74547] [189461] (1 PDB entry)
  16. 2527119Staphylococcus aureus [TaxId:1280] [189405] (1 PDB entry)
  17. 2527122Thermus thermophilus HB8 [TaxId:300852] [189563] (1 PDB entry)
  18. 2527129Toxoplasma gondii [TaxId:5811] [193044] (1 PDB entry)
  19. 3050751Entamoeba histolytica [TaxId:5759] [350813] (1 PDB entry)

More info for Protein automated matches from d.80.1.0: automated matches

Timeline for Protein automated matches from d.80.1.0: automated matches: