Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2358952Superfamily b.1.2: Fibronectin type III [49265] (2 families) (S)
  5. 2358953Family b.1.2.1: Fibronectin type III [49266] (45 proteins)
    Pfam PF00041
  6. 2359419Protein automated matches [190888] (2 species)
    not a true protein

Species:

  1. 2359420Human (Homo sapiens) [TaxId:9606] [188282] (31 PDB entries)
    1. Domains for 2aew:
      1. 2359474Domain d2aewa1: 2aew A:29-129 [126648]
        automated match to d2aewa1
      2. 2359475Domain d2aewa2: 2aew A:130-233 [126649]
        automated match to d2aewa2
      3. 2359476Domain d2aewb1: 2aew B:31-129 [126650]
        automated match to d2aewb1
      4. 2359477Domain d2aewb2: 2aew B:130-233 [126651]
        automated match to d2aewb2
    2. Domain for 2ec9:
    3. Domains for 2lag:
      1. 2359495Domain d2lagb1: 2lag B:1-109 [242824]
        Other proteins in same PDB: d2laga_
        automated match to d2hyma1
      2. 2359496Domain d2lagb2: 2lag B:110-212 [242825]
        Other proteins in same PDB: d2laga_
        automated match to d2hyma2
    4. Domain for 2mnu:
    5. Domain for 2rb8:
    6. Domains for 2rbl:
      1. 2359450Domain d2rbla_: 2rbl A: [198333]
        automated match to d2rblm_
      2. 2359451Domain d2rblb_: 2rbl B: [198334]
        automated match to d2rblm_
      3. 2359452Domain d2rblm_: 2rbl M: [168046]
        automated match to d1tena_
    7. Domains for 3bpl:
      1. 2359456Domain d3bplb1: 3bpl B:2-96 [199113]
        Other proteins in same PDB: d3bpla_, d3bplb3, d3bplc1, d3bplc2
        automated match to d1iarb1
        complexed with nag
      2. 2359457Domain d3bplb2: 3bpl B:97-199 [199114]
        Other proteins in same PDB: d3bpla_, d3bplb3, d3bplc1, d3bplc2
        automated match to d1iarb2
        complexed with nag
    8. Domains for 3bpn:
      1. 2359466Domain d3bpnb1: 3bpn B:2-96 [239162]
        Other proteins in same PDB: d3bpna_, d3bpnb3
        automated match to d3bplb1
        complexed with nag
      2. 2359467Domain d3bpnb2: 3bpn B:97-198 [239163]
        Other proteins in same PDB: d3bpna_, d3bpnb3
        automated match to d3bplb2
        complexed with nag
    9. Domains for 3bpo:
      1. 2359468Domain d3bpob1: 3bpo B:2-96 [245390]
        Other proteins in same PDB: d3bpoa_, d3bpob3
        automated match to d3bplb1
        complexed with nag
      2. 2359469Domain d3bpob2: 3bpo B:97-196 [245391]
        Other proteins in same PDB: d3bpoa_, d3bpob3
        automated match to d3bplb2
        complexed with nag
    10. Domains for 3d1m:
      1. 2359439Domain d3d1mc_: 3d1m C: [161636]
        Other proteins in same PDB: d3d1ma_, d3d1mb_
        automated match to d1x4ya1
        complexed with ca, zn
      2. 2359440Domain d3d1md_: 3d1m D: [161637]
        Other proteins in same PDB: d3d1ma_, d3d1mb_
        automated match to d1x4ya1
        complexed with ca, zn
    11. Domains for 3d48:
      1. 2359448Domain d3d48r1: 3d48 R:2-100 [157289]
        Other proteins in same PDB: d3d48p_
        automated match to d3nceb1
        complexed with co3
      2. 2359449Domain d3d48r2: 3d48 R:101-204 [157290]
        Other proteins in same PDB: d3d48p_
        automated match to d3mzgb2
        complexed with co3
    12. Domains for 3mzg:
      1. 2359437Domain d3mzgb1: 3mzg B:1-100 [232958]
        Other proteins in same PDB: d3mzga_
        automated match to d3d48r1
        complexed with cl, na
      2. 2359438Domain d3mzgb2: 3mzg B:101-206 [232959]
        Other proteins in same PDB: d3mzga_
        automated match to d3d48r2
        complexed with cl, na
    13. Domain for 3n06:
    14. Domains for 3n0p:
      1. 2359435Domain d3n0pb1: 3n0p B:1-100 [239488]
        Other proteins in same PDB: d3n0pa_
        automated match to d3mzgb1
        complexed with cl, na; mutant
      2. 2359436Domain d3n0pb2: 3n0p B:101-206 [239489]
        Other proteins in same PDB: d3n0pa_
        automated match to d3mzgb2
        complexed with cl, na; mutant
    15. Domains for 3n1f:
      1. 2359422Domain d3n1fc_: 3n1f C: [181781]
        Other proteins in same PDB: d3n1fa_, d3n1fb_, d3n1fd2
        automated match to d1x4ya1
        complexed with ca, zn
      2. 2359423Domain d3n1fd1: 3n1f D:826-924 [181782]
        Other proteins in same PDB: d3n1fa_, d3n1fb_, d3n1fd2
        automated match to d1x4ya1
        complexed with ca, zn
    16. Domains for 3n1g:
      1. 2359429Domain d3n1gc_: 3n1g C: [181785]
        Other proteins in same PDB: d3n1ga_, d3n1gb_
        automated match to d1x4ya1
        complexed with ca, mg, zn
      2. 2359430Domain d3n1gd_: 3n1g D: [181786]
        Other proteins in same PDB: d3n1ga_, d3n1gb_
        automated match to d1x4ya1
        complexed with ca, mg, zn
    17. Domain for 3n1m:
    18. Domain for 3n1p:
    19. Domains for 3n1q:
      1. 2359453Domain d3n1qc_: 3n1q C: [181801]
        Other proteins in same PDB: d3n1qa_, d3n1qb_, d3n1qe_
        automated match to d1x4ya1
        complexed with ca, zn
      2. 2359454Domain d3n1qd_: 3n1q D: [181802]
        Other proteins in same PDB: d3n1qa_, d3n1qb_, d3n1qe_
        automated match to d1x4ya1
        complexed with ca, zn
      3. 2359455Domain d3n1qf_: 3n1q F: [181804]
        Other proteins in same PDB: d3n1qa_, d3n1qb_, d3n1qe_
        automated match to d1x4ya1
        complexed with ca, zn
    20. Domains for 3ncb:
      1. 2359445Domain d3ncbb1: 3ncb B:1-100 [239490]
        Other proteins in same PDB: d3ncba_
        automated match to d3mzgb1
        complexed with cl, co3, na; mutant
      2. 2359446Domain d3ncbb2: 3ncb B:101-206 [239491]
        Other proteins in same PDB: d3ncba_
        automated match to d3mzgb2
        complexed with cl, co3, na; mutant
    21. Domains for 3ncc:
      1. 2359458Domain d3nccb1: 3ncc B:1-100 [232997]
        Other proteins in same PDB: d3ncca_
        automated match to d3d48r1
        complexed with cl, co3, na; mutant
      2. 2359459Domain d3nccb2: 3ncc B:101-206 [232998]
        Other proteins in same PDB: d3ncca_
        automated match to d3d48r2
        complexed with cl, co3, na; mutant
    22. Domains for 3nce:
      1. 2359442Domain d3nceb1: 3nce B:1-100 [233001]
        Other proteins in same PDB: d3ncea_
        automated match to d3d48r1
        complexed with cl, co3, na; mutant
      2. 2359443Domain d3nceb2: 3nce B:101-206 [233002]
        Other proteins in same PDB: d3ncea_
        automated match to d3d48r2
        complexed with cl, co3, na; mutant
    23. Domains for 3ncf:
      1. 2359482Domain d3ncfb1: 3ncf B:1-100 [232999]
        Other proteins in same PDB: d3ncfa_
        automated match to d3d48r1
        complexed with cl, na; mutant
      2. 2359483Domain d3ncfb2: 3ncf B:101-206 [233000]
        Other proteins in same PDB: d3ncfa_
        automated match to d3d48r2
        complexed with cl, na; mutant
    24. Domains for 3s9d:
      1. 2359431Domain d3s9db1: 3s9d B:12-109 [233523]
        Other proteins in same PDB: d3s9da_, d3s9dc_
        automated match to d2hyma1
        complexed with cl
      2. 2359432Domain d3s9db2: 3s9d B:110-204 [233525]
        Other proteins in same PDB: d3s9da_, d3s9dc_
        automated match to d2hyma2
        complexed with cl
      3. 2359433Domain d3s9dd1: 3s9d D:11-109 [233522]
        Other proteins in same PDB: d3s9da_, d3s9dc_
        automated match to d2hyma1
        complexed with cl
      4. 2359434Domain d3s9dd2: 3s9d D:110-205 [233524]
        Other proteins in same PDB: d3s9da_, d3s9dc_
        automated match to d2hyma2
        complexed with cl
    25. Domains for 4lxo:
      1. 2359424Domain d4lxoa1: 4lxo A:1326-1417 [258667]
        automated match to d2mfna1
        complexed with ca
      2. 2359425Domain d4lxoa2: 4lxo A:1418-1509 [258670]
        automated match to d2mfna2
        complexed with ca
      3. 2359426Domain d4lxob1: 4lxo B:1326-1417 [258668]
        automated match to d2mfna1
        complexed with ca
      4. 2359427Domain d4lxob2: 4lxo B:1418-1509 [258671]
        automated match to d2mfna2
        complexed with ca
    26. Domains for 4y5v:
      1. 2359460Domain d4y5vc1: 4y5v C:9-116 [272041]
        Other proteins in same PDB: d4y5va_, d4y5vb_, d4y5vd_, d4y5ve_, d4y5vg_, d4y5vh_
        automated match to d1eerb1
        complexed with gol, peg, pge
      2. 2359461Domain d4y5vc2: 4y5v C:117-223 [272042]
        Other proteins in same PDB: d4y5va_, d4y5vb_, d4y5vd_, d4y5ve_, d4y5vg_, d4y5vh_
        automated match to d1cn4b2
        complexed with gol, peg, pge
      3. 2359462Domain d4y5vf1: 4y5v F:9-116 [272046]
        Other proteins in same PDB: d4y5va_, d4y5vb_, d4y5vd_, d4y5ve_, d4y5vg_, d4y5vh_
        automated match to d1eerb1
        complexed with gol, peg, pge
      4. 2359463Domain d4y5vf2: 4y5v F:117-223 [272047]
        Other proteins in same PDB: d4y5va_, d4y5vb_, d4y5vd_, d4y5ve_, d4y5vg_, d4y5vh_
        automated match to d1cn4b2
        complexed with gol, peg, pge
      5. 2359464Domain d4y5vi1: 4y5v I:10-116 [272044]
        Other proteins in same PDB: d4y5va_, d4y5vb_, d4y5vd_, d4y5ve_, d4y5vg_, d4y5vh_
        automated match to d1eerb1
        complexed with gol, peg, pge
      6. 2359465Domain d4y5vi2: 4y5v I:117-219 [272045]
        Other proteins in same PDB: d4y5va_, d4y5vb_, d4y5vd_, d4y5ve_, d4y5vg_, d4y5vh_
        automated match to d1cn4b2
        complexed with gol, peg, pge
    27. Domains for 4y5x:
      1. 2359486Domain d4y5xc1: 4y5x C:11-116 [270878]
        Other proteins in same PDB: d4y5xa_, d4y5xb1, d4y5xb2, d4y5xd_, d4y5xe1, d4y5xe2, d4y5xg_, d4y5xh1, d4y5xh2, d4y5xj_, d4y5xk1, d4y5xk2
        automated match to d1eerb1
        complexed with flc, peg
      2. 2359487Domain d4y5xc2: 4y5x C:117-222 [270879]
        Other proteins in same PDB: d4y5xa_, d4y5xb1, d4y5xb2, d4y5xd_, d4y5xe1, d4y5xe2, d4y5xg_, d4y5xh1, d4y5xh2, d4y5xj_, d4y5xk1, d4y5xk2
        automated match to d1cn4b2
        complexed with flc, peg
      3. 2359488Domain d4y5xf1: 4y5x F:11-116 [270880]
        Other proteins in same PDB: d4y5xa_, d4y5xb1, d4y5xb2, d4y5xd_, d4y5xe1, d4y5xe2, d4y5xg_, d4y5xh1, d4y5xh2, d4y5xj_, d4y5xk1, d4y5xk2
        automated match to d1eerb1
        complexed with flc, peg
      4. 2359489Domain d4y5xf2: 4y5x F:117-222 [270881]
        Other proteins in same PDB: d4y5xa_, d4y5xb1, d4y5xb2, d4y5xd_, d4y5xe1, d4y5xe2, d4y5xg_, d4y5xh1, d4y5xh2, d4y5xj_, d4y5xk1, d4y5xk2
        automated match to d1cn4b2
        complexed with flc, peg
      5. 2359490Domain d4y5xi1: 4y5x I:10-116 [270884]
        Other proteins in same PDB: d4y5xa_, d4y5xb1, d4y5xb2, d4y5xd_, d4y5xe1, d4y5xe2, d4y5xg_, d4y5xh1, d4y5xh2, d4y5xj_, d4y5xk1, d4y5xk2
        automated match to d1eerb1
        complexed with flc, peg
      6. 2359491Domain d4y5xi2: 4y5x I:117-222 [270885]
        Other proteins in same PDB: d4y5xa_, d4y5xb1, d4y5xb2, d4y5xd_, d4y5xe1, d4y5xe2, d4y5xg_, d4y5xh1, d4y5xh2, d4y5xj_, d4y5xk1, d4y5xk2
        automated match to d1cn4b2
        complexed with flc, peg
      7. 2359492Domain d4y5xl1: 4y5x L:11-116 [270886]
        Other proteins in same PDB: d4y5xa_, d4y5xb1, d4y5xb2, d4y5xd_, d4y5xe1, d4y5xe2, d4y5xg_, d4y5xh1, d4y5xh2, d4y5xj_, d4y5xk1, d4y5xk2
        automated match to d1eerb1
        complexed with flc, peg
      8. 2359493Domain d4y5xl2: 4y5x L:117-224 [270887]
        Other proteins in same PDB: d4y5xa_, d4y5xb1, d4y5xb2, d4y5xd_, d4y5xe1, d4y5xe2, d4y5xg_, d4y5xh1, d4y5xh2, d4y5xj_, d4y5xk1, d4y5xk2
        automated match to d1cn4b2
        complexed with flc, peg
    28. Domains for 4y5y:
      1. 2359478Domain d4y5yc1: 4y5y C:9-116 [270873]
        Other proteins in same PDB: d4y5ya_, d4y5yb_, d4y5yd_, d4y5ye_
        automated match to d1eerb1
        complexed with gol
      2. 2359479Domain d4y5yc2: 4y5y C:117-220 [270874]
        Other proteins in same PDB: d4y5ya_, d4y5yb_, d4y5yd_, d4y5ye_
        automated match to d1cn4b2
        complexed with gol
      3. 2359480Domain d4y5yf1: 4y5y F:9-116 [270876]
        Other proteins in same PDB: d4y5ya_, d4y5yb_, d4y5yd_, d4y5ye_
        automated match to d1eerb1
        complexed with gol
      4. 2359481Domain d4y5yf2: 4y5y F:117-224 [270877]
        Other proteins in same PDB: d4y5ya_, d4y5yb_, d4y5yd_, d4y5ye_
        automated match to d1cn4b2
        complexed with gol
    29. Domains for 5e4e:
      1. 2359484Domain d5e4eb1: 5e4e B:1-96 [302127]
        Other proteins in same PDB: d5e4ea_
        automated match to d3bplb1
        complexed with nag, so4
      2. 2359485Domain d5e4eb2: 5e4e B:97-196 [302128]
        Other proteins in same PDB: d5e4ea_
        automated match to d3bplb2
        complexed with nag, so4
    30. Domains for 5fuc:
      1. 2359470Domain d5fucc1: 5fuc C:98-195 [328935]
        Other proteins in same PDB: d5fuca1, d5fuca2, d5fucb_, d5fuce_, d5fucv_
        automated match to d1n26a2
        complexed with nag
      2. 2359471Domain d5fucc2: 5fuc C:196-297 [328936]
        Other proteins in same PDB: d5fuca1, d5fuca2, d5fucb_, d5fuce_, d5fucv_
        automated match to d1n26a3
        complexed with nag
      3. 2359472Domain d5fucd1: 5fuc D:94-195 [328828]
        Other proteins in same PDB: d5fuca1, d5fuca2, d5fucb_, d5fuce_, d5fucv_
        automated match to d1n26a2
        complexed with nag
      4. 2359473Domain d5fucd2: 5fuc D:196-298 [328829]
        Other proteins in same PDB: d5fuca1, d5fuca2, d5fucb_, d5fuce_, d5fucv_
        automated match to d1n26a3
        complexed with nag
    31. Domains for 5n48:
      1. 3046640Domain d5n48b_: 5n48 B: [346702]
        Other proteins in same PDB: d5n48a_, d5n48c_, d5n48d2
        automated match to d2fnba_
      2. 3046654Domain d5n48d1: 5n48 D:1266-1357 [346716]
        Other proteins in same PDB: d5n48a_, d5n48c_, d5n48d2
        automated match to d2fnba_
  2. 3060816Escherichia coli [TaxId:562] [360878] (1 PDB entry)

More info for Protein automated matches from b.1.2.1: Fibronectin type III

Timeline for Protein automated matches from b.1.2.1: Fibronectin type III: