Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1779160Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 1779161Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 1779444Family b.22.1.0: automated matches [191519] (1 protein)
    not a true family
  6. 1779445Protein automated matches [190873] (3 species)
    not a true protein

Species:

  1. 1779446Human (Homo sapiens) [TaxId:9606] [188225] (20 PDB entries)
    1. Domains for 2ka3:
      1. 1779484Domain d2ka3a_: 2ka3 A: [242434]
        automated match to d4f3ja_
      2. 1779485Domain d2ka3b_: 2ka3 B: [242435]
        automated match to d4f3ja_
      3. 1779486Domain d2ka3c_: 2ka3 C: [242436]
        automated match to d4f3ja_
    2. Domains for 2o0o:
      1. 1779481Domain d2o0oa_: 2o0o A: [243258]
        automated match to d2re9a_
        complexed with mg
      2. 1779482Domain d2o0ob_: 2o0o B: [243259]
        automated match to d2re9a_
        complexed with mg
      3. 1779483Domain d2o0oc_: 2o0o C: [243260]
        automated match to d2re9a_
        complexed with mg
    3. Domains for 2oii:
      1. 1779487Domain d2oiia_: 2oii A: [243340]
        automated match to d4f3ja_
      2. 1779488Domain d2oiib_: 2oii B: [243341]
        automated match to d4f3ja_
      3. 1779489Domain d2oiic_: 2oii C: [243342]
        automated match to d4f3ja_
    4. Domain for 2qe3:
    5. Domains for 2re9:
      1. 1779452Domain d2re9a_: 2re9 A: [168062]
        automated match to d1a8ma_
        complexed with gol, mg
      2. 1779453Domain d2re9b_: 2re9 B: [168063]
        automated match to d1a8ma_
        complexed with gol, mg
      3. 1779454Domain d2re9c_: 2re9 C: [168064]
        automated match to d1a8ma_
        complexed with gol, mg
    6. Domain for 2rjk:
    7. Domain for 2rjl:
    8. Domain for 3k51:
    9. Domain for 3mi8:
    10. Domains for 4dou:
      1. 1779455Domain d4doua1: 4dou A:108-244 [251529]
        automated match to d1c3ha_
        complexed with ca, edo, gol, na
      2. 1779456Domain d4doua2: 4dou A:245-385 [251530]
        automated match to d1c3ha_
        complexed with ca, edo, gol, na
      3. 1779457Domain d4doua3: 4dou A:386-525 [251531]
        automated match to d1c3ha_
        complexed with ca, edo, gol, na
    11. Domains for 4en0:
      1. 1779475Domain d4en0a_: 4en0 A: [220674]
        automated match to d2re9a_
        complexed with gol, nag, po4
      2. 1779476Domain d4en0b_: 4en0 B: [220675]
        automated match to d2re9a_
        complexed with gol, nag, po4
      3. 1779477Domain d4en0c_: 4en0 C: [220676]
        automated match to d2re9a_
        complexed with gol, nag, po4
    12. Domain for 4f3j:
    13. Domains for 4j6g:
      1. 1779470Domain d4j6ga_: 4j6g A: [234929]
        automated match to d2re9a_
        complexed with cl, mg, nag
      2. 1779471Domain d4j6gb_: 4j6g B: [234930]
        automated match to d2re9a_
        complexed with cl, mg, nag
    14. Domains for 4kg8:
      1. 1779467Domain d4kg8a_: 4kg8 A: [240424]
        automated match to d4kg8b_
        mutant
      2. 1779468Domain d4kg8b_: 4kg8 B: [235163]
        automated match to d2re9a_
        mutant
    15. Domains for 4kgg:
      1. 1779473Domain d4kgga_: 4kgg A: [253265]
        automated match to d4kg8b_
        complexed with mg; mutant
      2. 1779474Domain d4kggb_: 4kgg B: [253266]
        automated match to d4kg8b_
        complexed with mg; mutant
    16. Domains for 4kgq:
      1. 1779459Domain d4kgqa_: 4kgq A: [224294]
        automated match to d1tnfa_
        complexed with mg; mutant
      2. 1779460Domain d4kgqb_: 4kgq B: [224295]
        automated match to d1tnfa_
        complexed with mg; mutant
    17. Domain for 4msv:
    18. Domains for 4nn0:
      1. 1779448Domain d4nn0a_: 4nn0 A: [238026]
        automated match to d4f3ja_
        complexed with act, edo, so4
      2. 1779449Domain d4nn0b_: 4nn0 B: [238025]
        automated match to d4f3ja_
        complexed with act, edo, so4
      3. 1779450Domain d4nn0c_: 4nn0 C: [238027]
        automated match to d4f3ja_
        complexed with act, edo, so4
    19. Domains for 4oul:
      1. 1779461Domain d4oula_: 4oul A: [263348]
        automated match to d4oulb_
        complexed with ca, gol
      2. 1779462Domain d4oulb_: 4oul B: [260722]
        automated match to d2wnve_
        complexed with ca, gol
      3. 1779463Domain d4oulc_: 4oul C: [263349]
        automated match to d4oulb_
        complexed with ca, gol
      4. 1779464Domain d4ould_: 4oul D: [263350]
        automated match to d4oulb_
        complexed with ca, gol
      5. 1779465Domain d4oule_: 4oul E: [263351]
        automated match to d4oulb_
        complexed with ca, gol
      6. 1779466Domain d4oulf_: 4oul F: [263352]
        automated match to d4oulb_
        complexed with ca, gol
    20. Domain for 4oum:
  2. 1779490Mus musculus [TaxId:10090] [271469] (6 PDB entries)
    1. Domains for 4qpy:
      1. 1779506Domain d4qpya_: 4qpy A: [271470]
        automated match to d4ousa_
      2. 1779507Domain d4qpyb_: 4qpy B: [271471]
        automated match to d4ousa_
      3. 1779508Domain d4qpyc_: 4qpy C: [271477]
        automated match to d4ousa_
    2. Domains for 4qq2:
      1. 1779493Domain d4qq2a_: 4qq2 A: [271478]
        automated match to d2ka3a_
        complexed with cd
      2. 1779494Domain d4qq2b_: 4qq2 B: [271480]
        automated match to d2ka3a_
        complexed with cd
      3. 1779495Domain d4qq2c_: 4qq2 C: [271481]
        automated match to d2ka3a_
        complexed with cd
    3. Domain for 4qqh:
    4. Domains for 4qql:
      1. 1779497Domain d4qqla_: 4qql A: [271694]
        automated match to d2ka3a_
        complexed with mg
      2. 1779498Domain d4qqlb_: 4qql B: [271698]
        automated match to d2ka3a_
        complexed with mg
      3. 1779499Domain d4qqlc_: 4qql C: [271697]
        automated match to d2ka3a_
        complexed with mg
      4. 1779500Domain d4qqld_: 4qql D: [271699]
        automated match to d2ka3a_
        complexed with mg
      5. 1779501Domain d4qqle_: 4qql E: [271701]
        automated match to d2ka3a_
        complexed with mg
      6. 1779502Domain d4qqlf_: 4qql F: [271696]
        automated match to d2ka3a_
        complexed with mg
      7. 1779503Domain d4qqlg_: 4qql G: [271702]
        automated match to d2ka3a_
        complexed with mg
      8. 1779504Domain d4qqlh_: 4qql H: [271700]
        automated match to d2ka3a_
        complexed with mg
      9. 1779505Domain d4qqli_: 4qql I: [271695]
        automated match to d2ka3a_
        complexed with mg
    5. Domain for 4qqo:
    6. Domain for 4qqp:
  3. 1779509Zebrafish (Danio rerio) [TaxId:7955] [260723] (1 PDB entry)

More info for Protein automated matches from b.22.1.0: automated matches

Timeline for Protein automated matches from b.22.1.0: automated matches: