Species:

1. Bacillus subtilis [TaxId:1423] [225130] (3 PDB entries)

   1. Domain for 2d1v:

      • Domain d2d1va_: 2d1v A: [203860] automated match to d1gxqa_

   2. Domains for 2krf:

      1. Domain d2krfa_: 2krf A: [264359] automated match to d2rnja_

      2. Domain d2krfb_: 2krf B: [264360] automated match to d2rnja_

   3. Domain for 3ulq:

      • Domain d3ulqb_: 3ulq B: [265526] automated match to d2rnja_ protein/DNA complex; complexed with mn

2. Deinococcus radiodurans [TaxId:1299] [226279] (2 PDB entries)

   1. Domain for 3q9s:

      • Domain d3q9sa2: 3q9s A:123-212 [215134] Other proteins in same PDB: d3q9sa1 automated match to d1kgsa1

   2. Domains for 3q9v:

      1. Domain d3q9va_: 3q9v A: [248810] automated match to d2pmub_

      2. Domain d3q9vb_: 3q9v B: [248811] automated match to d2pmub_

3. Enterococcus faecalis [TaxId:226185] [230777] (1 PDB entry)

   • Domain for 2hwv:

     • Domain d2hwva_: 2hwv A: [230778] automated match to d2pmub_ complexed with so4

4. Escherichia coli K-12 [TaxId:83333] [226337] (1 PDB entry)

   • Domain for 3zq7:

     • Domain d3zq7a_: 3zq7 A: [218399] automated match to d1gxqa_

5. Helicobacter pylori [TaxId:85963] [255221] (3 PDB entries)

   1. Domain for 2hqn:

      • Domain d2hqna_: 2hqn A: [242053] automated match to d2d1va_

   2. Domains for 2hqr:

      1. Domain d2hqra2: 2hqr A:118-223 [242057] Other proteins in same PDB: d2hqra1, d2hqrb1 automated match to d1kgsa1

      2. Domain d2hqrb2: 2hqr B:118-223 [242059] Other proteins in same PDB: d2hqra1, d2hqrb1 automated match to d1kgsa1

   3. Domain for 2k4j:

      • Domain d2k4ja_: 2k4j A: [242376] automated match to d1odda_

6. Klebsiella pneumoniae [TaxId:1185418] [255488] (1 PDB entry)

   • Domain for 2m87:

     • Domain d2m87a_: 2m87 A: [243136] automated match to d1gxpb_

7. Klebsiella pneumoniae [TaxId:573] [255310] (3 PDB entries)

   1. Domain for 2jzy:

      • Domain d2jzya_: 2jzy A: [242326] automated match to d1gxpa_

   2. Domain for 2mlk:

      • Domain d2mlka_: 2mlk A: [257942] automated match to d3zq7a_

   3. Domains for 4nhj:

      1. Domain d4nhja_: 4nhj A: [257989] automated match to d3zq7a_ protein/DNA complex

      2. Domain d4nhjb_: 4nhj B: [257990] automated match to d3zq7a_ protein/DNA complex

8. Mycobacterium tuberculosis [TaxId:1773] [188191] (3 PDB entries)

   1. Domains for 1zlj:

      1. Domain d1zlja_: 1zlj A: [162519] automated match to d1fsea_

      2. Domain d1zljb_: 1zlj B: [162520] automated match to d1fsea_

      3. Domain d1zljc_: 1zlj C: [162521] automated match to d1fsea_

      4. Domain d1zljd_: 1zlj D: [162522] automated match to d1fsea_

      5. Domain d1zlje_: 1zlj E: [162523] automated match to d1fsea_

      6. Domain d1zljf_: 1zlj F: [162524] automated match to d1fsea_

      7. Domain d1zljg_: 1zlj G: [162525] automated match to d1fsea_

      8. Domain d1zljh_: 1zlj H: [162526] automated match to d1fsea_

   2. Domains for 1zlk:

      1. Domain d1zlka_: 1zlk A: [241141] automated match to d1zljb_ protein/DNA complex

      2. Domain d1zlkb_: 1zlk B: [241142] automated match to d1zljb_ protein/DNA complex

   3. Domains for 3c57:

      1. Domain d3c57a_: 3c57 A: [199160] automated match to d3c57b_

      2. Domain d3c57b_: 3c57 B: [195256] automated match to d1zljb_

9. Mycobacterium tuberculosis [TaxId:83332] [225356] (2 PDB entries)

   1. Domain for 2oqr:

      • Domain d2oqra2: 2oqr A:129-226 [205352] Other proteins in same PDB: d2oqra1 automated match to d1p2fa1 complexed with act, bme, la

   2. Domains for 2pmu:

      1. Domain d2pmua_: 2pmu A: [205543] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

      2. Domain d2pmub_: 2pmu B: [205544] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

      3. Domain d2pmuc_: 2pmu C: [205545] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

      4. Domain d2pmud_: 2pmu D: [205546] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

      5. Domain d2pmue_: 2pmu E: [205547] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

      6. Domain d2pmuf_: 2pmu F: [205548] automated match to d1gxpb_ complexed with cl, gly, k, po4, unx

10. Salmonella typhimurium [TaxId:602] [267786] (1 PDB entry)

    • Domain for 2jpc:

      • Domain d2jpca_: 2jpc A: [264340] automated match to d2rnja_

11. Staphylococcus aureus [TaxId:1280] [225593] (3 PDB entries)

    1. Domain for 2rnj:

       • Domain d2rnja_: 2rnj A: [243728] automated match to d1zlja_

    2. Domains for 2zxj:

       1. Domain d2zxja_: 2zxj A: [207996] automated match to d1gxqa_

       2. Domain d2zxjb_: 2zxj B: [207997] automated match to d1gxqa_

    3. Domains for 4qwq:

       1. Domain d4qwqa_: 4qwq A: [276149] automated match to d4ixaa_

       2. Domain d4qwqb_: 4qwq B: [276251] automated match to d4ixaa_

12. Staphylococcus aureus [TaxId:1458279] [275992] (1 PDB entry)

    • Domains for 4u88:

      1. Domain d4u88a_: 4u88 A: [275993] automated match to d4ixaa_

      2. Domain d4u88b_: 4u88 B: [275994] automated match to d4ixaa_

13. Staphylococcus epidermidis [TaxId:176280] [236417] (1 PDB entry)

    • Domains for 4ixa:

      1. Domain d4ixaa_: 4ixa A: [240272] automated match to d4ixab_

      2. Domain d4ixab_: 4ixa B: [236418] automated match to d2z33a1

14. Streptococcus pyogenes [TaxId:1314] [226362] (1 PDB entry)

    • Domain for 3rjp:

      • Domain d3rjpa_: 3rjp A: [215897] automated match to d1gxpb_

More info for Protein automated matches from a.4.6.0: automated matches

Timeline for Protein automated matches from a.4.6.0: automated matches:

• Protein automated matches from a.4.6.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from a.4.6.0: automated matches appears in SCOPe 2.04
  
• Protein automated matches from a.4.6.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from a.4.6.0: automated matches appears in the current release, SCOPe 2.08