Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089162Superfamily c.1.16: Bacterial luciferase-like [51679] (5 families) (S)
    consists of clearly related families of somewhat different folds
  5. 2089216Family c.1.16.0: automated matches [191510] (1 protein)
    not a true family
  6. 2089217Protein automated matches [190849] (8 species)
    not a true protein

Species:

  1. 2089218Bacillus cereus [TaxId:222523] [226123] (1 PDB entry)
  2. 2089221Burkholderia pseudomallei [TaxId:320372] [189999] (1 PDB entry)
  3. 2089224Geobacillus thermodenitrificans [TaxId:33940] [225395] (2 PDB entries)
    1. Domains for 3b9n:
      1. 2089227Domain d3b9na_: 3b9n A: [208572]
        automated match to d3sdoa_
      2. 2089228Domain d3b9nb_: 3b9n B: [208573]
        automated match to d3sdoa_
    2. Domains for 3b9o:
      1. 2089225Domain d3b9oa_: 3b9o A: [208574]
        automated match to d3sdoa_
        complexed with fmn
      2. 2089226Domain d3b9ob_: 3b9o B: [208575]
        automated match to d3sdoa_
        complexed with fmn
  4. 2089229Methanosarcina barkeri [TaxId:2208] [188169] (1 PDB entry)
  5. 2089234Mycobacterium tuberculosis [TaxId:83332] [225443] (2 PDB entries)
    1. Domains for 3b4y:
      1. 2089235Domain d3b4ya_: 3b4y A: [208534]
        automated match to d1rhca_
        complexed with f42, flc
      2. 2089236Domain d3b4yb_: 3b4y B: [208535]
        automated match to d1rhca_
        complexed with f42, flc
    2. Domains for 3c8n:
      1. 2089237Domain d3c8na1: 3c8n A:1-334 [208816]
        Other proteins in same PDB: d3c8na2
        automated match to d1rhca_
      2. 2089238Domain d3c8nb_: 3c8n B: [208817]
        Other proteins in same PDB: d3c8na2
        automated match to d1rhca_
      3. 2089239Domain d3c8nc_: 3c8n C: [208818]
        Other proteins in same PDB: d3c8na2
        automated match to d1rhca_
      4. 2089240Domain d3c8nd_: 3c8n D: [208819]
        Other proteins in same PDB: d3c8na2
        automated match to d1rhca_
  6. 2270397Edta-degrading bacterium [TaxId:85561] [313702] (1 PDB entry)
  7. 2284351Rhodococcus jostii [TaxId:101510] [327652] (1 PDB entry)
  8. 2290522Bacillus subtilis [TaxId:1423] [333823] (1 PDB entry)

More info for Protein automated matches from c.1.16.0: automated matches

Timeline for Protein automated matches from c.1.16.0: automated matches: