Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2581248Class g: Small proteins [56992] (98 folds)
  3. 2583928Fold g.8: BPTI-like [57361] (1 superfamily)
    disulfide-rich alpha+beta fold
  4. 2583929Superfamily g.8.1: BPTI-like [57362] (4 families) (S)
  5. 2584197Family g.8.1.0: automated matches [191505] (1 protein)
    not a true family
  6. 2584198Protein automated matches [190829] (11 species)
    not a true protein

Species:

  1. 2584199Chinese cobra (Naja atra) [TaxId:8656] [255490] (1 PDB entry)
  2. 2584201Conus striatus [TaxId:6493] [255085] (2 PDB entries)
    1. Domain for 1yl2:
    2. Domain for 2ca7:
  3. 2584204Cow (Bos taurus) [TaxId:9913] [255754] (9 PDB entries)
    1. Domains for 3aue:
      1. 2584215Domain d3auea_: 3aue A: [245233]
        Other proteins in same PDB: d3aueb2
        automated match to d3gymi_
        complexed with so4
      2. 2584216Domain d3aueb1: 3aue B:1-58 [290863]
        Other proteins in same PDB: d3aueb2
        automated match to d4wxvc_
        complexed with so4
      3. 2584217Domain d3auef_: 3aue F: [245234]
        Other proteins in same PDB: d3aueb2
        automated match to d3gymi_
        complexed with so4
      4. 2584218Domain d3aueg_: 3aue G: [245235]
        Other proteins in same PDB: d3aueb2
        automated match to d3gymi_
        complexed with so4
    2. Domains for 3aug:
      1. 2584209Domain d3auga_: 3aug A: [290865]
        automated match to d4wxvc_
        complexed with so4
      2. 2584210Domain d3augc_: 3aug C: [245236]
        automated match to d3gymi_
        complexed with so4
    3. Domains for 3auh:
      1. 2584205Domain d3auha_: 3auh A: [245237]
        automated match to d3gymi_
        complexed with so4
      2. 2584206Domain d3auhc_: 3auh C: [245238]
        automated match to d3gymi_
        complexed with so4
      3. 2584207Domain d3auhe_: 3auh E: [245239]
        automated match to d3gymi_
        complexed with so4
      4. 2584208Domain d3auhg_: 3auh G: [245240]
        automated match to d3gymi_
        complexed with so4
    4. Domains for 3aui:
      1. 2584211Domain d3auia_: 3aui A: [245241]
        automated match to d3gymi_
        complexed with so4
      2. 2584212Domain d3auib_: 3aui B: [245242]
        automated match to d3gymi_
        complexed with so4
    5. Domains for 4bnr:
      1. 2584213Domain d4bnri_: 4bnr I: [240032]
        Other proteins in same PDB: d4bnra_, d4bnrb_
        automated match to d4isnb_
        complexed with ca, so4
      2. 2584214Domain d4bnrj_: 4bnr J: [240033]
        Other proteins in same PDB: d4bnra_, d4bnrb_
        automated match to d4isnb_
        complexed with ca, so4
    6. Domains for 4wxv:
      1. 2584222Domain d4wxvc_: 4wxv C: [275297]
        Other proteins in same PDB: d4wxva_, d4wxvb_
        automated match to d4bnri_
        complexed with ca, so4; mutant
      2. 2584223Domain d4wxvi_: 4wxv I: [275296]
        Other proteins in same PDB: d4wxva_, d4wxvb_
        automated match to d4bnri_
        complexed with ca, so4; mutant
    7. Domains for 5jb4:
      1. 2584219Domain d5jb4a_: 5jb4 A: [333289]
        automated match to d4wxvc_
        complexed with so4
      2. 2584220Domain d5jb4b_: 5jb4 B: [333195]
        automated match to d4wxvc_
        complexed with so4
      3. 2584221Domain d5jb4c_: 5jb4 C: [333232]
        automated match to d4wxvc_
        complexed with so4
    8. Domain for 5yvu:
    9. Domain for 5yw1:
  4. 2584224Human (Homo sapiens) [TaxId:9606] [188132] (10 PDB entries)
    1. Domain for 1yc0:
    2. Domain for 2ddi:
    3. Domain for 2ddj:
    4. Domain for 4isl:
    5. Domain for 4isn:
    6. Domain for 4iso:
    7. Domains for 4u30:
      1. 2584228Domain d4u30w_: 4u30 W: [261714]
        Other proteins in same PDB: d4u30a_, d4u30b_, d4u30c_, d4u30d_
        automated match to d3bybb_
        complexed with ca
      2. 2584229Domain d4u30x_: 4u30 X: [260451]
        Other proteins in same PDB: d4u30a_, d4u30b_, d4u30c_, d4u30d_
        automated match to d3bybb_
        complexed with ca
      3. 2584230Domain d4u30y_: 4u30 Y: [261713]
        Other proteins in same PDB: d4u30a_, d4u30b_, d4u30c_, d4u30d_
        automated match to d3bybb_
        complexed with ca
      4. 2584231Domain d4u30z_: 4u30 Z: [260982]
        Other proteins in same PDB: d4u30a_, d4u30b_, d4u30c_, d4u30d_
        automated match to d3bybb_
        complexed with ca
    8. Domain for 4u32:
    9. Domain for 5nmv:
    10. Domains for 6bx8:
      1. 3064295Domain d6bx8f_: 6bx8 F: [364357]
        Other proteins in same PDB: d6bx8a_, d6bx8c_, d6bx8e_, d6bx8g_
        automated match to d1dena_
        complexed with so4
      2. 3064304Domain d6bx8b_: 6bx8 B: [364366]
        Other proteins in same PDB: d6bx8a_, d6bx8c_, d6bx8e_, d6bx8g_
        automated match to d1dena_
        complexed with so4
      3. 3064318Domain d6bx8d_: 6bx8 D: [364380]
        Other proteins in same PDB: d6bx8a_, d6bx8c_, d6bx8e_, d6bx8g_
        automated match to d1dena_
        complexed with so4
      4. 3064320Domain d6bx8h_: 6bx8 H: [364382]
        Other proteins in same PDB: d6bx8a_, d6bx8c_, d6bx8e_, d6bx8g_
        automated match to d1dena_
        complexed with so4
  5. 2584236Hyla annectans [TaxId:317325] [255336] (1 PDB entry)
  6. 2584238Lychas mucronatus [TaxId:172552] [255470] (1 PDB entry)
  7. 2584240Micrurus tener [TaxId:1114302] [237085] (3 PDB entries)
    1. Domain for 4ntw:
    2. Domain for 4ntx:
    3. Domain for 4nty:
  8. 2584244Ornithoctonus huwena [TaxId:29017] [255283] (1 PDB entry)
  9. 2584246Pseudonaja textilis [TaxId:169397] [188742] (4 PDB entries)
    1. Domains for 3byb:
      1. 2584247Domain d3byba_: 3byb A: [172929]
        automated match to d1jc6a_
        complexed with etx, so4
      2. 2584248Domain d3bybb_: 3byb B: [172930]
        automated match to d1jc6a_
        complexed with etx, so4
      3. 2584249Domain d3bybc_: 3byb C: [172931]
        automated match to d1jc6a_
        complexed with etx, so4
    2. Domain for 3d65:
    3. Domains for 3uir:
      1. 2584251Domain d3uirc_: 3uir C: [194177]
        Other proteins in same PDB: d3uira_, d3uirb_
        automated match to d3bybb_
        complexed with so4
      2. 2584252Domain d3uird_: 3uir D: [200989]
        Other proteins in same PDB: d3uira_, d3uirb_
        automated match to d3bybb_
        complexed with so4
    4. Domains for 5zj3:
      1. 3067207Domain d5zj3c_: 5zj3 C: [367269]
        automated match to d1jc6a_
      2. 3067218Domain d5zj3b_: 5zj3 B: [367280]
        automated match to d1jc6a_
      3. 3067226Domain d5zj3a_: 5zj3 A: [367288]
        automated match to d1jc6a_
  10. 2584253Rhipicephalus microplus [TaxId:6941] [255526] (1 PDB entry)
  11. 2584258Sabellastarte magnifica [TaxId:389514] [256198] (1 PDB entry)

More info for Protein automated matches from g.8.1.0: automated matches

Timeline for Protein automated matches from g.8.1.0: automated matches: