Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1689992Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)
  3. 1693973Fold e.17: D-aminoacid aminotransferase-like PLP-dependent enzymes [56751] (1 superfamily)
    2 domains: (1) alpha+beta: beta3-alpha2-beta2; (2) alpha/beta, a part of its mixed sheet forms barrel: n=6, S=8
  4. 1693974Superfamily e.17.1: D-aminoacid aminotransferase-like PLP-dependent enzymes [56752] (2 families) (S)
  5. 1694057Family e.17.1.0: automated matches [191499] (1 protein)
    not a true family
  6. 1694058Protein automated matches [190815] (9 species)
    not a true protein

Species:

  1. 1694059Burkholderia pseudomallei [TaxId:28450] [226245] (1 PDB entry)
  2. 1694066Burkholderia pseudomallei [TaxId:557724] [260287] (1 PDB entry)
  3. 1694069Mycobacterium smegmatis [TaxId:1772] [232037] (2 PDB entries)
    1. Domain for 3dtg:
    2. Domains for 3jz6:
      1. 1694070Domain d3jz6a_: 3jz6 A: [247072]
        automated match to d3dtga_
        complexed with gol, plp
      2. 1694071Domain d3jz6b_: 3jz6 B: [247073]
        automated match to d3dtga_
        complexed with gol, plp
  4. 1694073Mycobacterium smegmatis [TaxId:246196] [232034] (2 PDB entries)
    1. Domains for 3dtf:
      1. 1694075Domain d3dtfa_: 3dtf A: [232035]
        automated match to d2coib_
        complexed with gol, so4
      2. 1694076Domain d3dtfb_: 3dtf B: [232036]
        automated match to d2coib_
        complexed with gol, so4
    2. Domain for 3dtg:
  5. 1694077Mycobacterium tuberculosis [TaxId:1773] [232507] (1 PDB entry)
  6. 1694079Streptococcus mutans [TaxId:1309] [256238] (1 PDB entry)
  7. 1694081Thermotoga maritima [TaxId:243274] [188420] (1 PDB entry)
  8. 1694086Thermus thermophilus HB8 [TaxId:300852] [188374] (4 PDB entries)
    1. Domains for 2eiy:
      1. 1694087Domain d2eiya_: 2eiy A: [164071]
        automated match to d1a3ga_
        complexed with 4mv, mpd, plp
      2. 1694088Domain d2eiyb_: 2eiy B: [164072]
        automated match to d1a3ga_
        complexed with 4mv, mpd, plp
      3. 1694089Domain d2eiyc_: 2eiy C: [164073]
        automated match to d1a3ga_
        complexed with 4mv, mpd, plp
    2. Domains for 2ej0:
      1. 1694090Domain d2ej0a_: 2ej0 A: [164074]
        automated match to d1a3ga_
        complexed with mpd, pmp
      2. 1694091Domain d2ej0b_: 2ej0 B: [164075]
        automated match to d1a3ga_
        complexed with mpd, pmp
      3. 1694092Domain d2ej0c_: 2ej0 C: [164076]
        automated match to d1a3ga_
        complexed with mpd, pmp
      4. 1694093Domain d2ej0d_: 2ej0 D: [164077]
        automated match to d1a3ga_
        complexed with mpd, pmp
      5. 1694094Domain d2ej0e_: 2ej0 E: [164078]
        automated match to d1a3ga_
        complexed with mpd, pmp
      6. 1694095Domain d2ej0f_: 2ej0 F: [164079]
        automated match to d1a3ga_
        complexed with mpd, pmp
    3. Domains for 2ej2:
      1. 1694096Domain d2ej2a_: 2ej2 A: [164080]
        automated match to d1a3ga_
        complexed with mpd, ppe
      2. 1694097Domain d2ej2b_: 2ej2 B: [164081]
        automated match to d1a3ga_
        complexed with mpd, ppe
      3. 1694098Domain d2ej2c_: 2ej2 C: [164082]
        automated match to d1a3ga_
        complexed with mpd, ppe
      4. 1694099Domain d2ej2d_: 2ej2 D: [164083]
        automated match to d1a3ga_
        complexed with mpd, ppe
      5. 1694100Domain d2ej2e_: 2ej2 E: [164084]
        automated match to d1a3ga_
        complexed with mpd, ppe
      6. 1694101Domain d2ej2f_: 2ej2 F: [164085]
        automated match to d1a3ga_
        complexed with mpd, ppe
    4. Domains for 2ej3:
      1. 1694102Domain d2ej3a_: 2ej3 A: [164086]
        automated match to d1a3ga_
        complexed with gbn, mpd, plp
      2. 1694103Domain d2ej3b_: 2ej3 B: [164087]
        automated match to d1a3ga_
        complexed with gbn, mpd, plp
      3. 1694104Domain d2ej3c_: 2ej3 C: [164088]
        automated match to d1a3ga_
        complexed with gbn, mpd, plp
  9. 1694105Thermus thermophilus [TaxId:274] [188090] (1 PDB entry)

More info for Protein automated matches from e.17.1.0: automated matches

Timeline for Protein automated matches from e.17.1.0: automated matches: