Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1655733Fold d.61: LigT-like [55143] (1 superfamily)
    duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III
  4. 1655734Superfamily d.61.1: LigT-like [55144] (5 families) (S)
  5. 1655778Family d.61.1.0: automated matches [191492] (1 protein)
    not a true family
  6. 1655779Protein automated matches [190796] (4 species)
    not a true protein

Species:

  1. 1655780Carassius auratus [TaxId:7957] [255230] (1 PDB entry)
  2. 1655782Escherichia coli [TaxId:83333] [260567] (1 PDB entry)
  3. 1655784Pyrococcus furiosus [TaxId:186497] [255177] (1 PDB entry)
  4. 1655786Pyrococcus horikoshii [TaxId:53953] [188054] (2 PDB entries)
    1. Domain for 1vdx:
    2. Domain for 1vgj:

More info for Protein automated matches from d.61.1.0: automated matches

Timeline for Protein automated matches from d.61.1.0: automated matches: