Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 996821Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 996837Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families) (S)
    complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
  5. 997471Family c.56.2.0: automated matches [191488] (1 protein)
    not a true family
  6. 997472Protein automated matches [190781] (6 species)
    not a true protein

Species:

  1. 997473Blood fluke (Schistosoma mansoni) [TaxId:6183] [188022] (12 PDB entries)
    1. Domains for 1tcu:
      1. 997495Domain d1tcua_: 1tcu A: [161757]
        automated match to d1a9oa_
        complexed with act, dms, po4
      2. 997496Domain d1tcub_: 1tcu B: [161758]
        automated match to d1a9oa_
        complexed with act, dms, po4
      3. 997497Domain d1tcuc_: 1tcu C: [161759]
        automated match to d1a9oa_
        complexed with act, dms, po4
    2. Domains for 1tcv:
      1. 997474Domain d1tcva_: 1tcv A: [161760]
        automated match to d1a9oa_
        complexed with act, nds
      2. 997475Domain d1tcvb_: 1tcv B: [161761]
        automated match to d1a9oa_
        complexed with act, nds
      3. 997476Domain d1tcvc_: 1tcv C: [161762]
        automated match to d1a9oa_
        complexed with act, nds
    3. Domains for 1td1:
      1. 997483Domain d1td1a_: 1td1 A: [161763]
        automated match to d1a9oa_
        complexed with act
      2. 997484Domain d1td1b_: 1td1 B: [161764]
        automated match to d1a9oa_
        complexed with act
      3. 997485Domain d1td1c_: 1td1 C: [161765]
        automated match to d1a9oa_
        complexed with act
    4. Domains for 3djf:
      1. 997507Domain d3djfa_: 3djf A: [173984]
        automated match to d1a9oa_
        complexed with bc3, dms, so4
      2. 997508Domain d3djfb_: 3djf B: [173985]
        automated match to d1a9oa_
        complexed with bc3, dms, so4
      3. 997509Domain d3djfc_: 3djf C: [173986]
        automated match to d1a9oa_
        complexed with bc3, dms, so4
    5. Domains for 3e0q:
      1. 997486Domain d3e0qa_: 3e0q A: [174441]
        automated match to d1a9oa_
        complexed with dms, jfd
      2. 997487Domain d3e0qb_: 3e0q B: [174442]
        automated match to d1a9oa_
        complexed with dms, jfd
      3. 997488Domain d3e0qc_: 3e0q C: [174443]
        automated match to d1a9oa_
        complexed with dms, jfd
    6. Domains for 3e9r:
      1. 997477Domain d3e9ra_: 3e9r A: [174776]
        automated match to d1a9oa_
        complexed with act, ade, dms, so4
      2. 997478Domain d3e9rb_: 3e9r B: [174777]
        automated match to d1a9oa_
        complexed with act, ade, dms, so4
      3. 997479Domain d3e9rc_: 3e9r C: [174778]
        automated match to d1a9oa_
        complexed with act, ade, dms, so4
    7. Domains for 3e9z:
      1. 997504Domain d3e9za_: 3e9z A: [174784]
        automated match to d1a9oa_
        complexed with 6gu, act, dms, so4
      2. 997505Domain d3e9zb_: 3e9z B: [174785]
        automated match to d1a9oa_
        complexed with 6gu, act, dms, so4
      3. 997506Domain d3e9zc_: 3e9z C: [174786]
        automated match to d1a9oa_
        complexed with 6gu, act, dms, so4
    8. Domains for 3f8w:
      1. 997501Domain d3f8wa_: 3f8w A: [175574]
        automated match to d1a9oa_
        complexed with adn, dms, so4
      2. 997502Domain d3f8wb_: 3f8w B: [175575]
        automated match to d1a9oa_
        complexed with adn, dms, so4
      3. 997503Domain d3f8wc_: 3f8w C: [175576]
        automated match to d1a9oa_
        complexed with adn, dms, so4
    9. Domains for 3faz:
      1. 997489Domain d3faza_: 3faz A: [175630]
        automated match to d1a9oa_
        complexed with nos, so4
      2. 997490Domain d3fazb_: 3faz B: [175631]
        automated match to d1a9oa_
        complexed with nos, so4
      3. 997491Domain d3fazc_: 3faz C: [175632]
        automated match to d1a9oa_
        complexed with nos, so4
    10. Domains for 3fb1:
      1. 997492Domain d3fb1a_: 3fb1 A: [175633]
        automated match to d1a9oa_
        complexed with act, r1p
      2. 997493Domain d3fb1b_: 3fb1 B: [175634]
        automated match to d1a9oa_
        complexed with act, r1p
      3. 997494Domain d3fb1c_: 3fb1 C: [175635]
        automated match to d1a9oa_
        complexed with act, r1p
    11. Domains for 3fnq:
      1. 997480Domain d3fnqa_: 3fnq A: [175924]
        automated match to d1a9oa_
        complexed with dms, hpa, so4
      2. 997481Domain d3fnqb_: 3fnq B: [175925]
        automated match to d1a9oa_
        complexed with dms, hpa, so4
      3. 997482Domain d3fnqc_: 3fnq C: [175926]
        automated match to d1a9oa_
        complexed with dms, hpa, so4
    12. Domains for 3iex:
      1. 997498Domain d3iexa_: 3iex A: [178289]
        automated match to d1a9oa_
        complexed with act, dms, gmp, so4
      2. 997499Domain d3iexb_: 3iex B: [178290]
        automated match to d1a9oa_
        complexed with act, dms, gmp, so4
      3. 997500Domain d3iexc_: 3iex C: [178291]
        automated match to d1a9oa_
        complexed with act, dms, gmp, so4
  2. 997510Entamoeba (Entamoeba histolytica) [TaxId:5759] [189769] (1 PDB entry)
  3. 997513Grouper iridovirus [TaxId:127569] [189220] (1 PDB entry)
  4. 997518Helicobacter pylori [TaxId:85963] [189517] (3 PDB entries)
    1. Domains for 3nm4:
      1. 997520Domain d3nm4a_: 3nm4 A: [182385]
        automated match to d1jysa_
        complexed with edo, trs
      2. 997521Domain d3nm4b_: 3nm4 B: [182386]
        automated match to d1jysa_
        complexed with edo, trs
    2. Domains for 3nm5:
      1. 997522Domain d3nm5a_: 3nm5 A: [182387]
        automated match to d1jysa_
        complexed with fmc
      2. 997523Domain d3nm5b_: 3nm5 B: [182388]
        automated match to d1jysa_
        complexed with fmc
    3. Domain for 3nm6:
  5. 997524Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [189329] (1 PDB entry)
  6. 997526Streptococcus pneumoniae [TaxId:171101] [188196] (1 PDB entry)

More info for Protein automated matches from c.56.2.0: automated matches

Timeline for Protein automated matches from c.56.2.0: automated matches: