Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2548549Fold d.151: DNase I-like [56218] (1 superfamily)
    contains beta-sandwich; duplication of alpha+beta motif
  4. 2548550Superfamily d.151.1: DNase I-like [56219] (4 families) (S)
  5. 2548661Family d.151.1.0: automated matches [191468] (1 protein)
    not a true family
  6. 2548662Protein automated matches [190734] (12 species)
    not a true protein

Species:

  1. 2548663Archaeoglobus fulgidus [TaxId:2234] [188717] (1 PDB entry)
  2. 2548666Bacillus subtilis [TaxId:224308] [319245] (1 PDB entry)
  3. 2548668Methanosarcina mazei [TaxId:192952] [316349] (1 PDB entry)
  4. 2548670Methanothermobacter thermautotrophicus [TaxId:187420] [229730] (15 PDB entries)
    1. Domain for 3fzi:
    2. Domains for 3g00:
      1. 2548672Domain d3g00a1: 3g00 A:2-257 [232217]
        Other proteins in same PDB: d3g00a2
        automated match to d2jc5a_
        protein/DNA complex; complexed with gol, mpd, po4
      2. 2548673Domain d3g00b_: 3g00 B: [232218]
        Other proteins in same PDB: d3g00a2
        automated match to d2jc5a_
        protein/DNA complex; complexed with gol, mpd, po4
    3. Domain for 3g0a:
    4. Domains for 3g0r:
      1. 2548684Domain d3g0ra_: 3g0r A: [236707]
        automated match to d3g00a_
        protein/DNA complex; complexed with gol, na, pg4
      2. 2548685Domain d3g0rb_: 3g0r B: [236706]
        automated match to d3g00a_
        protein/DNA complex; complexed with gol, na, pg4
    5. Domains for 3g1k:
      1. 2548693Domain d3g1ka_: 3g1k A: [246228]
        automated match to d3g4tb_
        complexed with mg
      2. 2548694Domain d3g1kb_: 3g1k B: [246229]
        automated match to d3g4tb_
        complexed with mg
    6. Domains for 3g2c:
      1. 2548682Domain d3g2ca1: 3g2c A:2-257 [236709]
        Other proteins in same PDB: d3g2ca2
        automated match to d3fzia_
        protein/DNA complex; complexed with gol, mg, po4
      2. 2548683Domain d3g2cb_: 3g2c B: [236715]
        Other proteins in same PDB: d3g2ca2
        automated match to d3fzia_
        protein/DNA complex; complexed with gol, mg, po4
    7. Domains for 3g2d:
      1. 2548680Domain d3g2da_: 3g2d A: [236710]
        automated match to d3g00a_
        protein/DNA complex; complexed with gol, pg4, po4
      2. 2548681Domain d3g2db_: 3g2d B: [236708]
        automated match to d3g00a_
        protein/DNA complex; complexed with gol, pg4, po4
    8. Domain for 3g38:
    9. Domains for 3g3c:
      1. 2548691Domain d3g3ca_: 3g3c A: [246233]
        Other proteins in same PDB: d3g3cb2
        automated match to d3g4tb_
        protein/DNA complex; complexed with mg, mrd, po4
      2. 2548692Domain d3g3cb1: 3g3c B:2-257 [246234]
        Other proteins in same PDB: d3g3cb2
        automated match to d3g4tb_
        protein/DNA complex; complexed with mg, mrd, po4
    10. Domains for 3g3y:
      1. 2548686Domain d3g3ya1: 3g3y A:2-257 [236711]
        Other proteins in same PDB: d3g3ya2
        automated match to d3fzia_
        protein/DNA complex; complexed with gol, mg
      2. 2548687Domain d3g3yb_: 3g3y B: [236714]
        Other proteins in same PDB: d3g3ya2
        automated match to d3fzia_
        protein/DNA complex; complexed with gol, mg
    11. Domains for 3g4t:
      1. 2548689Domain d3g4ta_: 3g4t A: [236716]
        automated match to d3fzia_
        protein/DNA complex; complexed with mg, po4
      2. 2548690Domain d3g4tb_: 3g4t B: [236712]
        automated match to d3fzia_
        protein/DNA complex; complexed with mg, po4
    12. Domain for 3g91:
    13. Domains for 3ga6:
      1. 2548678Domain d3ga6a_: 3ga6 A: [236717]
        automated match to d3g00a_
        protein/DNA complex; complexed with gol, na, po4
      2. 2548679Domain d3ga6b_: 3ga6 B: [236713]
        automated match to d3g00a_
        protein/DNA complex; complexed with gol, na, po4
    14. Domain for 3w2x:
    15. Domains for 3w2y:
      1. 2548675Domain d3w2ya_: 3w2y A: [229731]
        automated match to d1vyba_
        complexed with fmt, mg, peg; mutant
      2. 2548676Domain d3w2yd_: 3w2y D: [233921]
        automated match to d3w2ya_
        complexed with fmt, mg, peg; mutant
  5. 2548696Neisseria meningitidis [TaxId:487] [187907] (2 PDB entries)
    1. Domain for 2jc4:
    2. Domain for 2jc5:
  6. 2548699Pseudomonas aeruginosa [TaxId:287] [226583] (2 PDB entries)
    1. Domain for 4f1r:
    2. Domain for 4jg3:
  7. 2548702Pseudomonas sp. [TaxId:1206777] [311520] (1 PDB entry)
  8. 2548704Salmonella enterica [TaxId:90370] [226727] (1 PDB entry)
  9. 2548706Silkworm (Bombyx mori) [TaxId:7091] [225293] (1 PDB entry)
  10. 2548708Staphylococcus aureus [TaxId:561307] [225915] (4 PDB entries)
    1. Domains for 3i41:
      1. 2548709Domain d3i41a_: 3i41 A: [211459]
        automated match to d1zwxa1
        mutant
      2. 2548710Domain d3i41b_: 3i41 B: [211460]
        automated match to d1zwxa1
        mutant
    2. Domains for 3i46:
      1. 2548713Domain d3i46a_: 3i46 A: [211462]
        automated match to d1zwxa1
        complexed with ca, cl; mutant
      2. 2548714Domain d3i46b_: 3i46 B: [211463]
        automated match to d1zwxa1
        complexed with ca, cl; mutant
    3. Domains for 3i48:
      1. 2548711Domain d3i48a_: 3i48 A: [211464]
        automated match to d1zwxa1
        complexed with mg, po4; mutant
      2. 2548712Domain d3i48b_: 3i48 B: [211465]
        automated match to d1zwxa1
        complexed with mg, po4; mutant
    4. Domains for 3i5v:
      1. 2548715Domain d3i5va_: 3i5v A: [211496]
        automated match to d1zwxa1
        complexed with dga
      2. 2548716Domain d3i5vb_: 3i5v B: [211497]
        automated match to d1zwxa1
        complexed with dga
      3. 2548717Domain d3i5vc_: 3i5v C: [211498]
        automated match to d1zwxa1
        complexed with dga
      4. 2548718Domain d3i5vd_: 3i5v D: [211499]
        automated match to d1zwxa1
        complexed with dga
  11. 2548719Streptomyces griseocarneus [TaxId:51201] [256476] (1 PDB entry)
  12. 2548721Sulfolobus islandicus [TaxId:930945] [326429] (1 PDB entry)

More info for Protein automated matches from d.151.1.0: automated matches

Timeline for Protein automated matches from d.151.1.0: automated matches: