Species:

1. Aeropyrum pernix [TaxId:56636] [193600] (1 PDB entry)

   • Domain for 4df3:

     • Domain d4df3b_: 4df3 B: [193601] automated match to d3id6c_ complexed with sam

2. Aquifex aeolicus [TaxId:224324] [188415] (4 PDB entries)

   1. Domains for 2yvl:

      1. Domain d2yvla_: 2yvl A: [170884] automated match to d1o54a_ complexed with sam

      2. Domain d2yvlb_: 2yvl B: [170885] automated match to d1o54a_ complexed with sam

      3. Domain d2yvlc_: 2yvl C: [170886] automated match to d1o54a_ complexed with sam

      4. Domain d2yvld_: 2yvl D: [170887] automated match to d1o54a_ complexed with sam

   2. Domain for 3ftc:

      • Domain d3ftca_: 3ftc A: [196594] automated match to d3tqsa_

   3. Domain for 3ftd:

      • Domain d3ftda_: 3ftd A: [196593] automated match to d3tqsa_

   4. Domain for 3ftf:

      • Domain d3ftfa_: 3ftf A: [196592] automated match to d3tqsa_ protein/RNA complex; complexed with k, sah

3. Aquifex aeolicus [TaxId:63363] [196336] (1 PDB entry)

   • Domain for 3r9x:

     • Domain d3r9xb_: 3r9x B: [196337] automated match to d3tqsa_ protein/RNA complex; complexed with act, gnp, mg, mrd

4. Coffea canephora [TaxId:49390] [188542] (2 PDB entries)

   1. Domain for 2efj:

      • Domain d2efja_: 2efj A: [163985] automated match to d1m6ex_ complexed with 37t, sah

   2. Domains for 2eg5:

      1. Domain d2eg5a_: 2eg5 A: [163991] automated match to d1m6ex_ complexed with sah, xts

      2. Domain d2eg5c_: 2eg5 C: [163992] automated match to d1m6ex_ complexed with sah, xts

      3. Domain d2eg5e_: 2eg5 E: [163993] automated match to d1m6ex_ complexed with sah, xts

      4. Domain d2eg5g_: 2eg5 G: [163994] automated match to d1m6ex_ complexed with sah, xts

5. Coxiella burnetii [TaxId:777] [189725] (2 PDB entries)

   1. Domains for 3tqs:

      1. Domain d3tqsa_: 3tqs A: [185914] automated match to d1qyra_

      2. Domain d3tqsb_: 3tqs B: [185915] automated match to d1qyra_

      3. Domain d3tqsc_: 3tqs C: [185916] automated match to d1qyra_

      4. Domain d3tqsd_: 3tqs D: [185917] automated match to d1qyra_

   2. Domain for 3tr6:

      • Domain d3tr6a_: 3tr6 A: [185925] automated match to d2avda1 complexed with ni, sah

6. Entamoeba histolytica [TaxId:5759] [195622] (1 PDB entry)

   • Domain for 3qv2:

     • Domain d3qv2a_: 3qv2 A: [195623] automated match to d1g55a_ complexed with sah, so4

7. Escherichia coli [TaxId:83333] [196426] (1 PDB entry)

   • Domain for 3lbf:

     • Domain d3lbfd_: 3lbf D: [196427] automated match to d2yxeb_ complexed with gol, po4, sah

8. Exiguobacterium sibiricum [TaxId:262543] [188449] (1 PDB entry)

   • Domains for 3d2l:

     1. Domain d3d2la_: 3d2l A: [173651] automated match to d1y8ca_ complexed with mg

     2. Domain d3d2lb_: 3d2l B: [173652] automated match to d1y8ca_ complexed with mg

     3. Domain d3d2lc_: 3d2l C: [173653] automated match to d1y8ca_ complexed with mg

     4. Domain d3d2ld_: 3d2l D: [173654] automated match to d1y8ca_ complexed with mg

9. Geobacter metallireducens [TaxId:269799] [188557] (1 PDB entry)

   • Domains for 3e05:

     1. Domain d3e05a_: 3e05 A: [174422] automated match to d1f38a_ complexed with cl, gol

     2. Domain d3e05b_: 3e05 B: [174423] automated match to d1f38a_ complexed with cl, gol

     3. Domain d3e05c_: 3e05 C: [174424] automated match to d1f38a_ complexed with cl, gol

     4. Domain d3e05d_: 3e05 D: [174425] automated match to d1f38a_ complexed with cl, gol

     5. Domain d3e05e_: 3e05 E: [174426] automated match to d1f38a_ complexed with cl, gol

     6. Domain d3e05f_: 3e05 F: [174427] automated match to d1f38a_ complexed with cl, gol

     7. Domain d3e05g_: 3e05 G: [174428] automated match to d1f38a_ complexed with cl, gol

     8. Domain d3e05h_: 3e05 H: [174429] automated match to d1f38a_ complexed with cl, gol

10. Geobacter sulfurreducens [TaxId:243231] [188338] (1 PDB entry)

    • Domains for 3c3p:

      1. Domain d3c3pa_: 3c3p A: [173025] automated match to d2avda1 complexed with cl, edo, peg

      2. Domain d3c3pb_: 3c3p B: [173026] automated match to d2avda1 complexed with cl, edo, peg

      3. Domain d3c3pc_: 3c3p C: [173027] automated match to d2avda1 complexed with cl, edo, peg

11. Human (Homo sapiens) [TaxId:9606] [187871] (2 PDB entries)

    1. Domain for 2ipx:

       • Domain d2ipxa_: 2ipx A: [165639] automated match to d1prya_ complexed with ca, mta

    2. Domains for 2nyu:

       1. Domain d2nyua_: 2nyu A: [166459] automated match to d1eiza_ protein/RNA complex; complexed with sam

       2. Domain d2nyub_: 2nyu B: [166460] automated match to d1eiza_ protein/RNA complex; complexed with sam

12. Leptospira interrogans [TaxId:173] [187817] (1 PDB entry)

    • Domains for 2hnk:

      1. Domain d2hnka_: 2hnk A: [165159] automated match to d1suia1 complexed with peg, sah, so4

      2. Domain d2hnkb_: 2hnk B: [165160] automated match to d1suia1 complexed with peg, sah, so4

      3. Domain d2hnkc_: 2hnk C: [165161] automated match to d1suia1 complexed with peg, sah, so4

13. Meaban virus [TaxId:35279] [188819] (1 PDB entry)

    • Domains for 2oxt:

      1. Domain d2oxta_: 2oxt A: [166914] automated match to d1l9ka_ complexed with sam

      2. Domain d2oxtb_: 2oxt B: [166915] automated match to d1l9ka_ complexed with sam

      3. Domain d2oxtc_: 2oxt C: [166916] automated match to d1l9ka_ complexed with sam

      4. Domain d2oxtd_: 2oxt D: [166917] automated match to d1l9ka_ complexed with sam

14. Methanocaldococcus jannaschii [TaxId:243232] [188256] (2 PDB entries)

    1. Domains for 2yxd:

       1. Domain d2yxda_: 2yxd A: [170905] automated match to d1f38a_ complexed with mes, so4

       2. Domain d2yxdb_: 2yxd B: [170906] automated match to d1f38a_ complexed with mes, so4

    2. Domains for 2yxe:

       1. Domain d2yxea_: 2yxe A: [170907] automated match to d1jg1a_ complexed with act

       2. Domain d2yxeb_: 2yxe B: [170908] automated match to d1jg1a_ complexed with act

15. Modoc virus [TaxId:64300] [189030] (2 PDB entries)

    1. Domains for 2wa1:

       1. Domain d2wa1a_: 2wa1 A: [169154] automated match to d1l9ka_ complexed with so4

       2. Domain d2wa1b_: 2wa1 B: [169155] automated match to d1l9ka_ complexed with so4

    2. Domains for 2wa2:

       1. Domain d2wa2a_: 2wa2 A: [169156] automated match to d1l9ka_ complexed with sam, so4

       2. Domain d2wa2b_: 2wa2 B: [169157] automated match to d1l9ka_ complexed with sam, so4

16. Mouse (Mus musculus) [TaxId:10090] [187843] (1 PDB entry)

    • Domains for 2i62:

      1. Domain d2i62a_: 2i62 A: [165404] automated match to d2a14a1 complexed with sah

      2. Domain d2i62b_: 2i62 B: [165405] automated match to d2a14a1 complexed with sah

      3. Domain d2i62c_: 2i62 C: [165406] automated match to d2a14a1 complexed with sah

      4. Domain d2i62d_: 2i62 D: [165407] automated match to d2a14a1 complexed with sah

17. Plasmodium falciparum [TaxId:36329] [187826] (7 PDB entries)

    1. Domains for 2hte:

       1. Domain d2htea_: 2hte A: [165243] automated match to d1xj5a_ complexed with 1pg, mta, so4, unx

       2. Domain d2hteb_: 2hte B: [165244] automated match to d1xj5a_ complexed with 1pg, mta, so4, unx

       3. Domain d2htec_: 2hte C: [165245] automated match to d1xj5a_ complexed with 1pg, mta, so4, unx

    2. Domains for 2i7c:

       1. Domain d2i7ca_: 2i7c A: [165417] automated match to d1xj5a_ complexed with 1pg, aat, gol

       2. Domain d2i7cb_: 2i7c B: [165418] automated match to d1xj5a_ complexed with 1pg, aat, gol

       3. Domain d2i7cc_: 2i7c C: [165419] automated match to d1xj5a_ complexed with 1pg, aat, gol

    3. Domains for 2pbf:

       1. Domain d2pbfa_: 2pbf A: [167109] automated match to d1i1na_ complexed with sah

       2. Domain d2pbfb_: 2pbf B: [167110] automated match to d1i1na_ complexed with sah

    4. Domain for 2plw:

       • Domain d2plwa_: 2plw A: [167210] automated match to d1eiza_ complexed with sam, so4

    5. Domains for 2pwp:

       1. Domain d2pwpa_: 2pwp A: [167314] automated match to d1xj5a_ complexed with gol, so4, spd

       2. Domain d2pwpb_: 2pwp B: [167315] automated match to d1xj5a_ complexed with gol, so4, spd

       3. Domain d2pwpc_: 2pwp C: [167316] automated match to d1xj5a_ complexed with gol, so4, spd

    6. Domains for 3b7p:

       1. Domain d3b7pa_: 3b7p A: [172470] automated match to d1xj5a_ complexed with mta, spm

       2. Domain d3b7pb_: 3b7p B: [172471] automated match to d1xj5a_ complexed with mta, spm

       3. Domain d3b7pc_: 3b7p C: [172472] automated match to d1xj5a_ complexed with mta, spm

    7. Domains for 3rie:

       1. Domain d3rieb_: 3rie B: [195538] automated match to d2i7ca_ complexed with 1pg, gol, jfq, mta

       2. Domain d3riec_: 3rie C: [195537] automated match to d2i7ca_ complexed with 1pg, gol, jfq, mta

18. Spodoptera frugiperda [TaxId:7108] [194322] (1 PDB entry)

    • Domains for 4h0n:

      1. Domain d4h0na_: 4h0n A: [194323] automated match to d1g55a_ complexed with ca, sah; mutant

      2. Domain d4h0nc_: 4h0n C: [194324] automated match to d1g55a_ complexed with ca, sah; mutant

19. Sulfolobus solfataricus [TaxId:2287] [189014] (1 PDB entry)

    • Domain for 3id6:

      • Domain d3id6c_: 3id6 C: [178242] automated match to d1prya_ protein/RNA complex; complexed with sam

20. Synechocystis sp. [TaxId:1148] [195466] (1 PDB entry)
    • Domain for 3cbg:

      • Domain d3cbga_: 3cbg A: [195467] automated match to d3tr6a_ complexed with 4fe, fer, mg, sah

21. Thermoplasma volcanium [TaxId:50339] [188579] (1 PDB entry)

    • Domain for 3dou:

      • Domain d3doua_: 3dou A: [174103] automated match to d1eiza_ complexed with sam

22. Trypanosoma cruzi [TaxId:353153] [188400] (2 PDB entries)

    1. Domains for 3bwb:

       1. Domain d3bwba_: 3bwb A: [172877] automated match to d1xj5a_

       2. Domain d3bwbb_: 3bwb B: [172878] automated match to d1xj5a_

    2. Domains for 3bwc:

       1. Domain d3bwca_: 3bwc A: [172879] automated match to d1xj5a_ complexed with bme, sam

       2. Domain d3bwcb_: 3bwc B: [172880] automated match to d1xj5a_ complexed with bme, sam

23. Yellow fever virus [TaxId:11090] [188732] (6 PDB entries)

    1. Domain for 3eva:

       • Domain d3evaa_: 3eva A: [175244] automated match to d1r6aa_ protein/RNA complex; complexed with sah

    2. Domain for 3evb:

       • Domain d3evba_: 3evb A: [175245] automated match to d1r6aa_ protein/RNA complex; complexed with sah

    3. Domain for 3evc:

       • Domain d3evca_: 3evc A: [175246] automated match to d1r6aa_ protein/RNA complex; complexed with gtp, sah

    4. Domain for 3evd:

       • Domain d3evda_: 3evd A: [175247] automated match to d1r6aa_ protein/RNA complex; complexed with gtp, sah

    5. Domain for 3eve:

       • Domain d3evea_: 3eve A: [175248] automated match to d1r6aa_ protein/RNA complex; complexed with g3a, sah

    6. Domain for 3evf:

       • Domain d3evfa_: 3evf A: [175249] automated match to d1r6aa_ protein/RNA complex; complexed with gta, sah

More info for Protein automated matches from c.66.1.0: automated matches

Timeline for Protein automated matches from c.66.1.0: automated matches:

• Protein automated matches from c.66.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from c.66.1.0: automated matches appears in SCOPe 2.03
  
• Protein automated matches from c.66.1.0: automated matches appears in the current release, SCOPe 2.08