Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 999457Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 999458Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (58 families) (S)
  5. 1000528Family c.66.1.0: automated matches [191451] (1 protein)
    not a true family
  6. 1000529Protein automated matches [190689] (17 species)
    not a true protein

Species:

  1. 1000530Aquifex aeolicus [TaxId:224324] [188415] (1 PDB entry)
  2. 1000535Coffea canephora [TaxId:49390] [188542] (2 PDB entries)
    1. Domain for 2efj:
    2. Domains for 2eg5:
      1. 1000537Domain d2eg5a_: 2eg5 A: [163991]
        automated match to d1m6ex_
        complexed with sah, xts
      2. 1000538Domain d2eg5c_: 2eg5 C: [163992]
        automated match to d1m6ex_
        complexed with sah, xts
      3. 1000539Domain d2eg5e_: 2eg5 E: [163993]
        automated match to d1m6ex_
        complexed with sah, xts
      4. 1000540Domain d2eg5g_: 2eg5 G: [163994]
        automated match to d1m6ex_
        complexed with sah, xts
  3. 1000541Coxiella burnetii [TaxId:777] [189725] (2 PDB entries)
    1. Domains for 3tqs:
      1. 1000542Domain d3tqsa_: 3tqs A: [185914]
        automated match to d1qyra_
      2. 1000543Domain d3tqsb_: 3tqs B: [185915]
        automated match to d1qyra_
      3. 1000544Domain d3tqsc_: 3tqs C: [185916]
        automated match to d1qyra_
      4. 1000545Domain d3tqsd_: 3tqs D: [185917]
        automated match to d1qyra_
    2. Domain for 3tr6:
  4. 1000547Exiguobacterium sibiricum [TaxId:262543] [188449] (1 PDB entry)
  5. 1000552Geobacter metallireducens [TaxId:269799] [188557] (1 PDB entry)
  6. 1000561Geobacter sulfurreducens [TaxId:243231] [188338] (1 PDB entry)
  7. 1000565Human (Homo sapiens) [TaxId:9606] [187871] (2 PDB entries)
    1. Domain for 2ipx:
    2. Domains for 2nyu:
      1. 1000567Domain d2nyua_: 2nyu A: [166459]
        automated match to d1eiza_
        protein/RNA complex; complexed with sam
      2. 1000568Domain d2nyub_: 2nyu B: [166460]
        automated match to d1eiza_
        protein/RNA complex; complexed with sam
  8. 1000569Leptospira interrogans [TaxId:173] [187817] (1 PDB entry)
  9. 1000573Meaban virus [TaxId:35279] [188819] (1 PDB entry)
  10. 1000578Methanocaldococcus jannaschii [TaxId:243232] [188256] (2 PDB entries)
    1. Domains for 2yxd:
      1. 1000581Domain d2yxda_: 2yxd A: [170905]
        automated match to d1f38a_
        complexed with mes, so4
      2. 1000582Domain d2yxdb_: 2yxd B: [170906]
        automated match to d1f38a_
        complexed with mes, so4
    2. Domains for 2yxe:
      1. 1000579Domain d2yxea_: 2yxe A: [170907]
        automated match to d1jg1a_
        complexed with act
      2. 1000580Domain d2yxeb_: 2yxe B: [170908]
        automated match to d1jg1a_
        complexed with act
  11. 1000583Modoc virus [TaxId:64300] [189030] (2 PDB entries)
    1. Domains for 2wa1:
      1. 1000586Domain d2wa1a_: 2wa1 A: [169154]
        automated match to d1l9ka_
        complexed with so4
      2. 1000587Domain d2wa1b_: 2wa1 B: [169155]
        automated match to d1l9ka_
        complexed with so4
    2. Domains for 2wa2:
      1. 1000584Domain d2wa2a_: 2wa2 A: [169156]
        automated match to d1l9ka_
        complexed with sam, so4
      2. 1000585Domain d2wa2b_: 2wa2 B: [169157]
        automated match to d1l9ka_
        complexed with sam, so4
  12. 1000588Mouse (Mus musculus) [TaxId:10090] [187843] (1 PDB entry)
  13. 1000593Plasmodium falciparum [TaxId:36329] [187826] (6 PDB entries)
    1. Domains for 2hte:
      1. 1000598Domain d2htea_: 2hte A: [165243]
        automated match to d1xj5a_
        complexed with 1pg, mta, so4, unx
      2. 1000599Domain d2hteb_: 2hte B: [165244]
        automated match to d1xj5a_
        complexed with 1pg, mta, so4, unx
      3. 1000600Domain d2htec_: 2hte C: [165245]
        automated match to d1xj5a_
        complexed with 1pg, mta, so4, unx
    2. Domains for 2i7c:
      1. 1000594Domain d2i7ca_: 2i7c A: [165417]
        automated match to d1xj5a_
        complexed with 1pg, aat, gol
      2. 1000595Domain d2i7cb_: 2i7c B: [165418]
        automated match to d1xj5a_
        complexed with 1pg, aat, gol
      3. 1000596Domain d2i7cc_: 2i7c C: [165419]
        automated match to d1xj5a_
        complexed with 1pg, aat, gol
    3. Domains for 2pbf:
      1. 1000607Domain d2pbfa_: 2pbf A: [167109]
        automated match to d1i1na_
        complexed with sah
      2. 1000608Domain d2pbfb_: 2pbf B: [167110]
        automated match to d1i1na_
        complexed with sah
    4. Domain for 2plw:
    5. Domains for 2pwp:
      1. 1000604Domain d2pwpa_: 2pwp A: [167314]
        automated match to d1xj5a_
        complexed with gol, so4, spd
      2. 1000605Domain d2pwpb_: 2pwp B: [167315]
        automated match to d1xj5a_
        complexed with gol, so4, spd
      3. 1000606Domain d2pwpc_: 2pwp C: [167316]
        automated match to d1xj5a_
        complexed with gol, so4, spd
    6. Domains for 3b7p:
      1. 1000601Domain d3b7pa_: 3b7p A: [172470]
        automated match to d1xj5a_
        complexed with mta, spm
      2. 1000602Domain d3b7pb_: 3b7p B: [172471]
        automated match to d1xj5a_
        complexed with mta, spm
      3. 1000603Domain d3b7pc_: 3b7p C: [172472]
        automated match to d1xj5a_
        complexed with mta, spm
  14. 1000609Sulfolobus solfataricus [TaxId:2287] [189014] (1 PDB entry)
  15. 1000611Thermoplasma volcanium [TaxId:50339] [188579] (1 PDB entry)
  16. 1000613Trypanosoma cruzi [TaxId:353153] [188400] (2 PDB entries)
    1. Domains for 3bwb:
      1. 1000616Domain d3bwba_: 3bwb A: [172877]
        automated match to d1xj5a_
      2. 1000617Domain d3bwbb_: 3bwb B: [172878]
        automated match to d1xj5a_
    2. Domains for 3bwc:
      1. 1000614Domain d3bwca_: 3bwc A: [172879]
        automated match to d1xj5a_
        complexed with bme, sam
      2. 1000615Domain d3bwcb_: 3bwc B: [172880]
        automated match to d1xj5a_
        complexed with bme, sam
  17. 1000618Yellow fever virus [TaxId:11090] [188732] (6 PDB entries)
    1. Domain for 3eva:
    2. Domain for 3evb:
    3. Domain for 3evc:
    4. Domain for 3evd:
    5. Domain for 3eve:
    6. Domain for 3evf:

More info for Protein automated matches from c.66.1.0: automated matches

Timeline for Protein automated matches from c.66.1.0: automated matches: